Bartonella vinsonii subsp. berkhoffii: BVwin_15150
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Entry
BVwin_15150 CDS
T02470
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bvn
Bartonella vinsonii subsp. berkhoffii
Pathway
bvn00300
Lysine biosynthesis
bvn00470
D-Amino acid metabolism
bvn01100
Metabolic pathways
bvn01110
Biosynthesis of secondary metabolites
bvn01120
Microbial metabolism in diverse environments
bvn01230
Biosynthesis of amino acids
Module
bvn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bvn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BVwin_15150 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BVwin_15150 (dapF)
Enzymes [BR:
bvn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BVwin_15150 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
SIN1_PH
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AGF76581
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Position
1789652..1790503
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AA seq
283 aa
AA seq
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MKTPFSKMNGLGNQIIVADMRESADALTQQAIFALSKDPQTHFDQIMAVHTSTKKEANFR
IEIWNTDGSMAKTCGNGTRCVIAWLTDHNLGETFQLETPAGIIEGKRQADGLISVDMGKP
HFNAKEMPVSREIVDTNHVELTAGPLKDASLVFIGNLHAIFFVGNDIQYIPLEKYGPKLE
HDPLFPERCNISIAYVTSKKSLNLRTWERGAGLTQACGSAACASAVAAYRRELTKRHIDV
NLPGGTLNIFYREDDHIIMTGPIKYEFSGFFDPLTGSYKKDHS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaccattcagtaaaatgaacggtttgggaaatcaaatcattgttgctgacatg
cgcgaaagcgctgatgctcttacacaacaagcaatttttgctttatcgaaagatcctcaa
acacattttgatcaaattatggccgtccacacatcaacaaaaaaagaagccaactttcgc
attgaaatatggaatactgacggttccatggctaaaacttgtggaaacggtacccgttgc
gtaattgcgtggctaacagaccataatcttggtgaaacttttcaattagaaacacccgct
ggaattattgaaggaaaacgccaagctgatggacttatctctgtcgacatgggaaagccc
catttcaacgcaaaagagatgcctgtttcacgtgaaatagttgataccaatcacgtagaa
cttactgctggtcctttaaaagacgcttcccttgtattcattggtaatctccatgctatt
ttttttgttggaaatgatattcaatatattccattagaaaagtacggaccaaaacttgaa
catgatcctcttttcccagagcgctgcaatatttctattgcttatgtcacgtcaaagaaa
agcctaaatttacgcacatgggagcgaggagcaggattaacgcaagcatgtggaagtgct
gcttgtgcgagtgcagtagcggcttatcgacgtgaactcacaaaacgccatatcgatgtg
aatttaccagggggaacactgaatattttttatcgagaagatgatcacattatcatgacg
ggtccaatcaaatatgaatttagtggtttctttgaccctttaacagggagttacaaaaag
gatcactcttaa
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