Bremerella volcania: Pan97_01450
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Entry
Pan97_01450 CDS
T06456
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bvo
Bremerella volcania
Pathway
bvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pan97_01450 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvo03019
]
Pan97_01450 (cshA)
03009 Ribosome biogenesis [BR:
bvo03009
]
Pan97_01450 (cshA)
Enzymes [BR:
bvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pan97_01450 (cshA)
Messenger RNA biogenesis [BR:
bvo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pan97_01450 (cshA)
Ribosome biogenesis [BR:
bvo03009
]
Prokaryotic type
rRNA helicases
Pan97_01450 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QDU73178
UniProt:
A0A518C1S9
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All DBs
Position
159932..161293
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AA seq
453 aa
AA seq
DB search
MLRWVGPARETADDNNDVLLPGDVPLRETVPTLSTPEDTPEKKFTDLNLSEKMLAALKEA
RYEVPSPIQAGVIPLALEGKDILGQARTGTGKTAAFGIPIIETLPSGKGPHALILVPTRE
LAVQVRDEIAKLSKGMSIQTVAIYGGKPIKGQMDKLKRNPDIIVGTPGRVIDHMTRRSLS
LDYLSIVVLDEADRMLDIGFRPDIEKILRRCPEQRQTMLLSATVPPPIERLANRYMRDPV
KVDFSPKNISADTIEQHYFTVDGPKKMELLVRLLRREQPTKCIVFCRTKRGTEKLFQRLQ
KKTKLVRCIHGDMHQGARNRTISDFKANKYRILIATDVVGRGIDISDVTLIVNYDVPEYS
DDYVHRVGRTGRMGKEGVAYTFVTPEEGNQLTRIEMRIDKLLIRDEIEGFDPYVKTSVET
SPTHARDTDGTAPAEEKKEPPKKAPRRRHRRAL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgctcagatgggttggacctgctcgagaaaccgctgacgacaacaacgacgtcttgctt
cctggcgacgtcccacttagagaaacggtcccaaccttgtcgacccctgaagatacccca
gaaaagaagttcaccgacctcaacctttccgaaaagatgctcgcggcgctgaaagaggcc
cgctacgaggtcccctcgcccatccaagccggagtcattcccttggccctggaagggaaa
gacatcctcggtcaggcccgcaccggtaccggcaagacggccgcgttcggcattccgatc
atcgagacccttccttccggcaaagggccgcacgcattgatcctggtgccgacccgcgag
ttggcggtccaggttcgcgacgagatcgccaagctatccaaagggatgagcatccaaacg
gtggccatctacggcggcaagccgatcaaggggcagatggacaagctgaagcgaaacccc
gacatcatcgtcgggacgccaggccgcgtgatcgatcacatgacacggcggtccctctcg
ctcgactacctcagcatagtcgtgctcgacgaagccgaccgcatgctcgacattggtttc
cggcctgacatcgagaagattctgcgccgctgccccgaacagcgccagacgatgctgctg
agcgccaccgttcctcccccgatcgagcgcctggccaaccgctatatgcgcgatccggtg
aaggtcgacttctctcccaagaacatctcggccgacacgatcgagcagcactacttcacg
gtcgatgggcccaagaagatggaactcctggtccgcctgcttcgccgcgagcagccgacc
aagtgcatcgtcttctgccgaaccaagcgcggcaccgagaagctcttccagcgtctgcaa
aagaagaccaagctggtccgctgcatccacggcgacatgcaccagggagcccgcaaccgc
acgatctccgacttcaaggcgaacaagtatcgcatcctgatcgccaccgacgtggtaggc
cgcgggatcgacatctcagacgtgacgttgattgtgaattacgacgtgccggaatactcc
gacgactacgtccaccgcgtgggacgcaccggccgcatggggaaggaaggggtcgcgtat
accttcgtgacgccggaagaagggaatcagctgacgcggatcgagatgcggatcgacaag
ctgttgattcgtgacgaaatcgaagggttcgacccgtacgtgaagacgtcggtcgaaacg
agtccgacgcatgcccgcgataccgacggaactgctccggccgaagaaaagaaagagcca
cccaagaaggctccccgtcgccgccaccgccgggcactttag
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