Bremerella volcania: Pan97_05040 Help Entry Pan97_05040       CDS       T06456                                  Symbol deaD Name (GenBank) ATP-dependent RNA helicase DeaD   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism bvo  Bremerella volcania Brite KEGG Orthology (KO) [BR:bvo00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bvo03400]     Pan97_05040 (deaD) Enzymes [BR:bvo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      Pan97_05040 (deaD)     5.6.2.6  RNA 3'-5' helicase      Pan97_05040 (deaD) DNA repair and recombination proteins [BR:bvo03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     Pan97_05040 (deaD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C ResIII WH3_Lhr Cas3-like_C_2 AlkZ-like PhoH Motif Other DBs NCBI-ProteinID:  QDU73531 UniProt:  A0A518C2S8 LinkDB All DBs Position complement(595014..599423) Genome browser AA seq 1469 aa AA seqDB search MSLELFHPVVQAWFTKRFGKPTEAQNAGWPSIAKGQCTLIAAPTGSGKTLAAFMVCLDQL FRRWLSGKLLDTTYVVYVSPLKALSNDIHRNLDVPLAEICDMAESMGMLPPQIRTAVRTG DTPSSQRQAMTRRPPHILVTTPESLYLMLTAERSRKTLRHVDTVIVDEIHALARDKRGSH LTITLERLEALCIEPPTRIGLSATQKPIEEIACFLVGAQRVDENDVPDCAIVDGGHRRQL DLEVSVPPSPLEAVCSNEQWGEVYDELVKLIQSHHSTLVFVNTRRMAERVAHRLTEVLGD EVITSHHGSLAKEIRHSAEQRLKDGKLKAIVATASLEMGIDIGYIDLVVQIGSARSIANF LQRVGRSGHSLHGTPKGRLFPLTRDELIECLALMRSVEKGELDRIEIPVAPLDILAQQVV AEVSAEEQDEAELYERFKRAWPYRDLSYPKYQDVLEMVNEGVTRSIKTGAHIHRDRINGK LRPRRGARISATTSGGAIPDMPIYRVVTDPEKQVVGTVDEHFAVDSKAGDVFLLGNTSWR VLAIRGSDVIVQDAQGQPPSVPFWFGEAPGRTIELSKEVADLREEIAEKIVAAADDPTRE RFKIQSQDGGLLESSFDQIDVETVKWVQAECHATPWAALQAVRYVAAQHAAMGLVPTQTK IVFERFFDEAGSMQLVVHAPLGTRINRAWGLAFRKRFCRSFDFELQASADDDGLVLSLGP QHSFPLEDMFKMLNSNNGQALLEQALLAFPMFGIRWRWNATRALAILRFMGGKKVPPHMV RFRSDDLLAAAFPDQVGCLENHNEDIKYPDHPLVQQTLHDCLTEGMDVERWKDLLRAVEA GEVQFIARQTREPSPFAHERINANPYSFLDPAGLEDRRTRAVTTRRTLAPGEMKELGQLS PEAIATVRREAWPTARDPDELHDVLSSMVALPESQGQEWHSLFDRLVSQGRATRYVREGH EPLWTATETLSIVEAALPGGTAEPRVSVPEGVGKQLESHQAWVELVRSAAPCLGPFSTEE LAQTWGLKTSSVHAACEAVEAEGIILRGQYSTEGSSHEGDLQWCDRRLLARIHRLTVNGL RQQIQPVERDVYLRFLVRHQLLQRETKSSGARGLNAVMNLLQGFEASAGSWERSLLAARM DDYDPDWLDDQLTSGELVWGRLRPPQGDAEEGPSMASLRRSVPMAIVQRENLGWLIPDVR QSAEALARGNAQDVLEALTSRGALFHQDLKVLTKLLPTHLDEALRELAALGLITCDSFSA VRKIVDESGTKKSRTRRKASATSRAGRWSLFPGIVEEVTAEDYLHRWCLQLIARYGVIFR DLLHRETAAPSWAQLVPMLRRMERRGELRGGRFVKNAGGEQYGTEQAIYALRKLRDAKQE DPWVAVSGTDPLNLAGVLTEGHKVPAIHTNALIWQNGQVVATKRGGEIEFLRPVDPNDQM EMTRALHAGRRLPPQTIPIGFPRRRSTAS NT seq 4410 nt NT seq  +upstreamnt  +downstreamnt atgtcgctcgagctatttcatcctgtcgttcaggcctggttcaccaagcggtttggcaag cccaccgaggcccaaaacgctggctggccgtcgattgccaaaggccagtgtacgctgatc gcggccccgaccggctcgggtaagacgctcgccgcattcatggtctgcctggaccagcta tttcgtcgttggctatcggggaagctactcgatacgacctacgtcgtttatgtttctccg ctgaaagcgctcagcaacgacatccatcgcaatctcgacgttccgctcgcagagatctgc gacatggccgagagcatgggcatgcttccgccccagatccgtacggccgtgcgaaccggc gataccccttcgtcgcagcgtcaagcgatgacgcggcgtccccctcacattctggtgacc acgccggaatcgctctacctgatgctgaccgccgagcgcagccgcaagacgctgcggcat gtcgatacggtcatcgtcgacgaaatccacgcgctggcgcgcgacaagcgcggctcgcac ctgacgatcaccctggagcgactcgaagccctgtgcatcgaacctccgacccgtattggc ttgtcggccacgcagaagcccatcgaagagattgcctgcttcctggtcggtgcccagcgc gtcgacgagaacgacgtgcctgactgtgcgatcgtcgacgggggccatcggcggcagctc gacctggaagtgagcgtccccccttctccgctggaagccgtctgctccaacgagcagtgg ggcgaagtgtacgacgaactggtgaaactcatccagtcgcatcacagcacgctcgtcttc gtcaacacgcgccgcatggccgaacgggtcgctcatcgcctgacggaagtccttggcgac gaggtgatcaccagccatcacggcagcctggccaaagagatccgccactcggccgaacag cggctgaaagacggcaaactgaaagcgatcgtcgcgaccgcttcgctcgagatggggatc gacatcggctatatcgacctggtcgtgcagatcggttcggctcgtagtatcgccaacttc ctgcagcgcgtcgggcgttctggccactcgctgcatggcacccccaagggacgcctgttt ccgctgacgcgcgacgagctgatcgagtgtctggctttgatgcgaagcgtcgagaaaggg gaactcgatcggatcgaaatcccggtcgccccgctcgatatcctcgcccagcaggtcgtc gcggaagtttcggccgaagagcaggacgaagccgaactgtacgagcgattcaaacgtgcc tggccttaccgcgacctttcgtacccgaagtaccaggacgtcctggagatggtgaacgag ggagtgacccgttcgatcaagaccggggcgcatatccatcgcgaccgcatcaacggcaag ctgcggccccgccgcggtgcccggatcagcgcgacgacctctggcggggcgatccccgac atgccgatctaccgcgtggtgaccgatccggaaaagcaagtcgtcggaaccgtcgacgag cacttcgccgtcgacagtaaagctggtgacgtcttcctgctaggtaacacctcgtggcgc gtgctggccattcgcggcagcgacgtcatcgtgcaggatgcccaaggccagccgccgagc gttcccttctggttcggcgaagccccaggccggacgatcgagctttccaaggaagtcgcc gacctgcgtgaggagatcgccgagaagatcgtcgccgcggcggatgacccaacgcgcgaa cgtttcaagattcaatcgcaagatggcggcctgctggagtcgtcattcgatcagatcgac gtcgagaccgtgaagtgggttcaggccgagtgccacgccacgccatgggccgctctgcaa gcggttcgctacgtcgccgctcagcatgcggcgatgggcttggtgccgacgcaaacgaaa atcgtcttcgaacgcttcttcgacgaagcaggcagcatgcagttggttgtgcacgcaccg ctggggacccgcatcaaccgggcctggggactggcgtttcgcaaacggttctgccggtcg ttcgactttgaactgcaagccagcgctgacgatgacggactggtcctttcgctgggaccg cagcacagctttccgttggaagacatgttcaagatgttgaactccaacaacggtcaggca ctgctcgaacaagcactcctggcgtttcccatgttcggcattcgctggcgctggaacgcg acccgcgcgctggcgatcctgcgattcatgggaggcaagaaggtcccgccccacatggta cgtttccgttccgacgacctgttggcggccgcgttccccgatcaggtcgggtgcctggaa aaccacaacgaagacatcaagtaccccgatcacccgctggtgcagcagacgctgcacgac tgtttgaccgaagggatggacgtcgaacgctggaaggatcttctgcgggcggtcgaagca ggcgaggtccagttcattgcccggcagacgcgcgagccatcgccgtttgcccacgagcgc atcaacgcgaatccgtattcgttcctcgatccggccgggctcgaagaccgccggacgcgt gccgtcaccacccgccgcacgctggcccctggcgagatgaaagaactggggcagctttct cccgaggcgatcgccacggtccgccgcgaggcctggccgaccgcgcgcgacccggacgaa ctacatgacgtgttgagttcgatggtcgctttgccggagtcgcaaggccaggagtggcat agtcttttcgatcgcctggtcagtcaaggccgcgcgacgcgttacgtccgcgagggtcac gagccactgtggacggcgaccgagaccctttcgatcgtcgaagcggcgctgcctggcgga acggctgaaccccgtgtgagcgtaccggaaggggtcggcaagcagttggaatcgcatcag gcctgggtcgaactggtgcgtagtgcggctccttgcctgggtccgttctcgacggaagag ctggcccagacctgggggctaaagacctcgagcgtgcatgcggcgtgtgaagcggtcgag gcggaagggatcatcctgcggggtcaatattcgaccgaaggctcttcccatgaaggggat ctacagtggtgcgatcggcggctgctggctcgcattcatcgcttgacggtcaacggcctg cgccagcagattcagccggtcgagcgtgacgtgtacctgcgttttctcgtgcggcaccaa ctgctgcagcgggaaacgaagtcgtccggcgcacgcggcctgaatgcggtgatgaacctc ttgcaaggcttcgaagcttcggccggaagctgggaacggagcttgctcgcggcgcgcatg gacgattacgacccggactggctcgacgatcagctgacttccggcgaactggtttgggga cgtctgcgaccaccgcagggggacgccgaagaaggtcccagcatggcgtcgctgcgccgc agcgtgccgatggcgatcgtgcagcgcgaaaacctgggctggctcatacccgacgtgcgg caatcggccgaagcgctggcgcgcggcaacgcgcaagatgtgctcgaagcattgacctcg cgcggggccctgtttcatcaagacctcaaagtgctcacgaagctattgccgactcacctg gacgaagccctgcgcgagttggcggccttggggctgatcacctgcgacagcttcagcgcc gtgcggaagatcgtcgacgaatcaggcaccaagaagtcgcgcacgcggcgcaaggccagc gccacctcgcgggccgggcggtggtcgctgttcccgggcatcgtcgaggaagtcaccgcc gaagattacctgcaccgctggtgcttgcagctgatcgcacggtacggggtgatcttccgc gacctgctgcaccgtgaaacggcagccccctcgtgggctcagctcgttccgatgctgcgg cggatggaacgtcggggcgaacttcgcgggggacgcttcgtgaagaatgccggcggcgag cagtacggcaccgagcaggccatctacgcgctgcgaaagctgcgcgatgccaagcaagag gatccctgggtcgcggtcagcggcaccgaccccttgaacctggccggcgtgctgaccgaa gggcataaggtgcccgcgattcataccaatgctctcatctggcagaacggccaggtcgtg gcgacaaagcggggaggcgagattgagtttttgcgtcccgtcgatcccaacgaccagatg gaaatgacccgagcgctgcacgcaggccgacgattaccgccacaaacgatcccgatcggc tttccccgtcgccgttcgaccgccagctag

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