KEGG   Bremerella volcania: Pan97_08090
Entry
Pan97_08090       CDS       T06456                                 
Symbol
sigD
Name
(GenBank) RNA polymerase sigma-D factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
bvo  Bremerella volcania
Pathway
bvo02020  Two-component system
bvo02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bvo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Pan97_08090 (sigD)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Pan97_08090 (sigD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bvo03021]
    Pan97_08090 (sigD)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:bvo02035]
    Pan97_08090 (sigD)
Transcription machinery [BR:bvo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Pan97_08090 (sigD)
Bacterial motility proteins [BR:bvo02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    Pan97_08090 (sigD)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_ECF HTH_23 HopW1-1 HTH_38 DUF134 KorB HTH_IclR
Other DBs
NCBI-ProteinID: QDU73809
UniProt: A0A518C3K4
LinkDB
Position
970809..971495
AA seq 228 aa
MTAEATQLEQRIQENQGLVISLAKSIHRKLPPQIGMDDLIAYGQLGLAEAAQSFEDDKGA
SFSTFAYYRIRGAIYDGISKMSWNSHAARMQNKYQQMAADTLQTDAAAGSTSTASAQENA
KWLGNLTEKLAVVYLASHGEETQHAFQAVADARTQQPAEQLENKEIQALLQKLLQTLAPH
EQQLIRMTYYEGYSLKEAADQLGKSKSWASRLHQAILERLARALRQTT
NT seq 687 nt   +upstreamnt  +downstreamnt
atgactgcggaagcgacccaactcgagcaacgcattcaagagaaccagggactggttatt
tccctggccaagtcgatccatcggaagctgcctccgcagattggcatggacgatctgatc
gcttatggacagcttgggcttgccgaggcggcccagtcttttgaggacgacaaaggcgcg
agcttttcgacgttcgcttactatcgcatccgtggcgctatctacgacggcatctcgaag
atgagttggaactctcacgccgccaggatgcagaataagtatcagcaaatggccgccgat
acgctgcaaaccgatgccgcagccggcagcacgtcgaccgcttcggcccaggaaaacgcg
aaatggctgggcaatctgaccgaaaagctcgcggttgtgtatttggccagccatggggaa
gaaacccagcacgcgttccaggccgtcgccgacgcgcgcacgcagcagccagccgagcag
ttagaaaacaaagagattcaagccctgctgcagaagctgctccagacgttggctccccac
gagcagcagttaattcggatgacctattacgagggttacagtctgaaagaagctgccgac
cagctaggtaaaagcaagtcgtgggccagccgtctgcatcaagccattttggagcgactg
gccagggctttgcgtcagacgacttag

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