KEGG   Bremerella volcania: Pan97_13480
Entry
Pan97_13480       CDS       T06456                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
bvo  Bremerella volcania
Pathway
bvo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bvo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Pan97_13480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bvo03021]
    Pan97_13480
   03019 Messenger RNA biogenesis [BR:bvo03019]
    Pan97_13480
Transcription machinery [BR:bvo03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Pan97_13480
Messenger RNA biogenesis [BR:bvo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Pan97_13480
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N S1CSD-TOTE-2 OB_RNB
Other DBs
NCBI-ProteinID: QDU74341
UniProt: A0A518C541
LinkDB
Position
1610783..1612408
AA seq 541 aa
MAHRNTTTNRNTNNNNSNSNNKLTSRVSQDANAFGAGIMPETSEAASDQANHSMPNSPQP
SDSSSNHASDGHRSSRGSNRRNNNSYDDGPEPMSLAEQIARGKHRGDQGEDDEQFEQLKH
SEVHIAELQKMSMQELIEEARKENLEDVSGSRRQDLIFRILKERVKMSGLMYGEGTLEIL
PDGFGFLRSPDYHYLSCPDDIYVSPSQIRRFGLKTGNIVTGQIRPPKENERYFALLRVEA
VNYQDPNVAAQKVFFDDLTPLHPDDRIRMETTPEEFSGRIIDLIVPIGFGQRGLIVSPPR
AGKTIMMQNMAKAVLTNYPEAYCIMLLIDERPEEVTDMERQVKGPNCEVISSTFDEPPSR
HVQVAEMVIEKAKRMVEFGTDVVIFLDSITRLARAWNSECPPSGKLLSGGLDANALQRPK
RFLGSARKVEEGGSLTIIATALVDTGSRMDDVIFEEFKGTGNQEIVLDRRMVDRRIYPAI
DINASGTRREEMLMDPEEYRRVCILRRVLNEMNPPDAMEFLLGHMSKNKTNAEFLMSMNV
Q
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggcacacagaaacacgacaacaaaccgaaataccaacaacaataattcgaattcgaat
aacaagttaacgtcccgggtctcgcaggacgccaacgcatttggtgccggcatcatgccg
gaaaccagtgaggctgcctcggatcaagccaatcattccatgcccaactcgccccaaccc
tctgactcttcctcgaaccacgcatcggacgggcatcgttcgtcacgcggttcgaaccga
cgcaacaacaacagctacgacgatggccccgagccgatgtcgctggccgagcagatcgct
cgcggcaaacatcgtggtgatcaaggggaagacgacgagcagttcgagcagctcaagcac
agcgaagtgcatatcgccgagctgcagaaaatgtcgatgcaggaactgatcgaagaggcc
cgcaaggagaacctcgaagacgtttccggctcgcgccgccaagacctgatcttccgcatc
ctgaaggaacgcgtgaagatgtcgggcctgatgtacggcgaagggacgctcgaaatcctg
cctgacggcttcggattcttgcgtagccccgactatcactacctgtcgtgcccggacgat
atctacgtctcccccagccagatccgccgatttggtttgaagacgggcaacatcgtcacc
gggcagatccgtccacccaaggaaaacgaacgctacttcgcgctcttgcgcgtcgaagcg
gtcaactatcaagacccgaacgtcgccgcccagaaggtcttcttcgacgacctcacgccg
ctgcacccggacgatcggatccggatggaaacgacgccggaagagttcagcggccgcatc
atcgacttgatcgtgccgatcggtttcggtcagcgtggtctgatcgtcagccccccgcgg
gccggtaagacgatcatgatgcaaaacatggccaaggcggttctgacgaactaccccgag
gcctactgcattatgctgctgatcgacgaacgtcccgaagaagtcaccgacatggagcgg
caggtcaaaggacccaactgcgaagtgatcagctcgaccttcgacgagccgccgtcgcgt
cacgttcaagtggccgaaatggtcatcgaaaaggccaagcgaatggtcgaattcgggacc
gacgtggttatcttcctcgactcgatcacgcgtctggcaagggcctggaatagcgaatgc
cctccttcgggcaagctcctttccggtggtctggatgctaacgccttgcagcgtcccaaa
cgcttcctcggttcggcccgtaaggtcgaagaggggggctcgctgacgatcatcgcgacg
gccctggtcgacaccggcagccgcatggacgacgtgatcttcgaggaattcaaaggaacc
ggtaaccaggaaatcgtgctcgatcgccgcatggtcgatcgtcgtatctacccagccatc
gacatcaacgccagcggtacccgccgcgaagagatgctgatggatccggaagaataccgc
cgcgtctgcatcctgcgtcgcgtgctcaacgaaatgaacccgcccgacgccatggagttc
ctgcttggtcacatgagcaagaacaaaaccaacgctgaatttctcatgagcatgaatgtg
cagtag

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