Bremerella volcania: Pan97_16050
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Entry
Pan97_16050 CDS
T06456
Symbol
groL1_1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bvo
Bremerella volcania
Pathway
bvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pan97_16050 (groL1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvo03019
]
Pan97_16050 (groL1_1)
03110 Chaperones and folding catalysts [BR:
bvo03110
]
Pan97_16050 (groL1_1)
03029 Mitochondrial biogenesis [BR:
bvo03029
]
Pan97_16050 (groL1_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bvo04147
]
Pan97_16050 (groL1_1)
Enzymes [BR:
bvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Pan97_16050 (groL1_1)
Messenger RNA biogenesis [BR:
bvo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pan97_16050 (groL1_1)
Chaperones and folding catalysts [BR:
bvo03110
]
Heat shock proteins
HSP60 / Chaperonin
Pan97_16050 (groL1_1)
Mitochondrial biogenesis [BR:
bvo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Pan97_16050 (groL1_1)
Exosome [BR:
bvo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pan97_16050 (groL1_1)
Exosomal proteins of other body fluids (saliva and urine)
Pan97_16050 (groL1_1)
Exosomal proteins of breast cancer cells
Pan97_16050 (groL1_1)
Exosomal proteins of colorectal cancer cells
Pan97_16050 (groL1_1)
Exosomal proteins of bladder cancer cells
Pan97_16050 (groL1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Cpn60_TCP1
HATPase_c
PDE8A_N
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
QDU74595
UniProt:
A0A518C5U2
LinkDB
All DBs
Position
1897790..1899889
Genome browser
AA seq
699 aa
AA seq
DB search
MSKMIAYDQDALEAIKRGVGTLSRAVTKTLGPRGRNVLLQKSFGPPVVTKDGVTVAKEID
LEDPFENIGARIVREVASKTNDVAGDGTTTATVLAEAIFNEGLRAVIGGIRPVHMKQGIE
QAVDDIVAKLKANSVPVKGKDDLTKVASIAANNDPTIGQHVADALDRVGKDGVVTLDEGK
TMRTEIEVVEGMQFDKGYLSPYFVTDASKMECVLEEPYILVHEKKITSIKDIVPLLEKVV
QAGRSLLIVAEDVEREALATLVVNRLRGTFQCCAVKAPAYGDRRKAMMEDLAILTGGTAI
FESLGIKLESLPLTDLGQAKQVIVDKDNTKVIQGGGKKADIQARIAQIQHELEKSTSDYD
REKLEERMPDGGSLSVRCTSDDGQAIVEVTDSGEGIAAADLERVFEPLYTRKTKGIGLGL
AVSKRYAEMNRGQLDVESELACGCSFRWSPSEGRQPMVETSGLNLLVVDDEPDMRSSLWR
ILRVQGHQVAVAESGEQAVDYVRDNEPDGVLMDIRMPGIGGVEAFRKIREASPDTFVIFM
TAYSEAAEEARDEGANVLPKPLDVEGICELIEETAATRPILVVDDDTDFCSSLERVLAGK
GYDVQIANTPAQAIGFFQKQPRALVLLDMKLNGAAGLEVLHELKQLNAAAVVVQMSGYSE
LEEDMRQGLEMNAYGYLTKPFDGDQMLAMLQQAMREPKK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaatgattgcttatgaccaagacgccctggaggccatcaaacgcggtgtgggc
acgctgtcgcgcgcggtcaccaaaaccctcggtccgcgcggtcgaaatgttctgctgcaa
aagagcttcggtcctccggtggttaccaaggacggcgtcaccgtggccaaagagatcgac
ttggaagatcccttcgagaacatcggtgctcgcatagtccgcgaagtggcttcaaaaacg
aacgatgtggcgggcgacggaactacgaccgccaccgtgctggccgaggctatcttcaac
gaaggcttgcgggccgttattggtgggattcggcccgttcacatgaaacagggcatcgag
caggcggtcgacgacatcgtcgcgaagctcaaagcgaactccgtgcctgtcaagggtaaa
gacgacctgaccaaagtcgcttccatcgccgccaacaacgatcccaccatcggccaacac
gtggccgacgcgctcgacagagtcggcaaggacggggtcgtaacactggacgaaggaaag
acgatgcgaaccgagatcgaagttgtcgaaggaatgcagttcgacaaaggttacctgtcg
ccgtacttcgtcaccgacgcgtccaagatggagtgcgtgctggaagagccgtacattctg
gtccacgaaaagaagatcaccagcatcaaggacatcgtgccgctgttggagaaggtggtt
caggccggcaggtcgctgttgatcgtcgccgaggacgtggaacgcgaggcgctggccacg
ctggtggtgaaccgtctgcgcgggacgttccagtgctgtgcggtcaaggctcccgcctac
ggagatcgccgcaaagcgatgatggaagaccttgcgattctgactggcggcacagcgatc
ttcgagagcctagggatcaagcttgaatcgctgccgctgaccgatctcggacaagcgaaa
caggtgattgtcgacaaagacaacaccaaggtcatccagggtggaggaaagaaagccgac
attcaggcccggatcgcgcagatccagcatgagcttgaaaagtccaccagcgattatgac
cgcgagaaactcgaggagcggatgccggacggcggttcgctgtctgttcgctgcaccagc
gacgatggccaagcgatcgtcgaagtgacggactcgggtgagggtatcgcggccgcggat
ttggagagagttttcgaaccgctttatacccgcaagaccaagggcatcggcctgggactc
gcggtttcaaaacgatacgcagaaatgaaccgaggtcagttagacgtcgaaagcgaactg
gcgtgcggctgttccttccgctggagcccgagtgaagggagacaaccgatggtcgaaacg
agtggtttgaatctgttggtcgtcgatgacgagccagatatgcgatcgagcttgtggcgc
atcttgcgcgtgcagggtcatcaagtggccgtggctgagagcggtgaacaggccgtggat
tacgtccgcgacaacgaaccggacggtgtcctcatggacatccgtatgcccggcatcggc
ggcgtggaagcattcaggaaaattcgcgaagcctcgcccgacacgttcgtcatctttatg
acggcgtactccgaagcggccgaagaagcccgcgatgaaggagctaacgtacttcccaag
ccgctcgacgtcgaaggcatctgcgaactgatcgaagagaccgcggcgactcgccccatc
ctggtcgtggacgacgatacggacttctgctcgtcactggagcgagtcctcgccggcaag
ggatacgacgtgcagatagccaacacgccggcgcaggcgatcggattctttcagaagcag
ccgcgggctttggtgttgctggacatgaagctgaacggggctgccggcctggaagtgctc
cacgagctaaagcagctcaacgccgcggcggtggtcgtgcagatgtccggttactccgag
ctggaagaggacatgcgccaaggcctggaaatgaatgcctacggctatctgaccaagccg
ttcgatggcgaccagatgctggccatgttgcagcaagccatgcgcgaaccgaagaaatga
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