Bremerella volcania: Pan97_19160
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Entry
Pan97_19160 CDS
T06456
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bvo
Bremerella volcania
Pathway
bvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pan97_19160 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvo03019
]
Pan97_19160 (rny)
Messenger RNA biogenesis [BR:
bvo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pan97_19160 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
ATP-synt_B
KH_KhpA-B
KH-I_KHDC4-BBP
dUTPase
KH_2
IL2
Motif
Other DBs
NCBI-ProteinID:
QDU74896
UniProt:
A0A518C6P5
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Position
complement(2242516..2244066)
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AA seq
516 aa
AA seq
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MSGFYYALTAAIAAIGAALLVKFIDRLRKKDVETEAQQILEKAKQDSENLKKEALLEAKE
EALRQKTEAERDLSKQRDEIREREKSLDRREESIEQQATHLRKQENMVETTQRRLSEKIE
ENDKRSTNLESIIRDQQERLHRMSGLNAEEAKSELLKLLDQQLQSETGAIILKHQRRMEE
EVRPIVQDMLLTAMQRFAAAHTAESTTSTVDIPSDEMKGRIIGREGRNIRSFEKETGVDV
IIDDTPGVVIVSGFDPVRREIARQSLNKLIADGRIHPSRIEEVVKETQSDIETTIRKKGE
EATTEINVMGLHPRLVEMLGRLHFRTSYSQNVLRHSIEVGFIAGLLAEMVGLDPQIARRA
GLLHDIGKAADHELEGGHPKIGADLLKRHGESPEVVHAAFGHHDEIITEYPYTMLVATAD
ACSASRPGARRETLERYIKRMEELESIATGFHGVEQAFAIQAGRELRVIASAKEVNDEMA
AKICRDIAKAFEEQLTYPGEIKVTMVRESRFTEFAR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgggttttattatgcattgacagcggctatcgcggcgattggagccgcgctgctt
gtcaagtttatcgatcggctccgaaagaaggacgtggagaccgaggcccaacagatcctg
gaaaaagccaaacaggattctgagaacctcaaaaaagaagctttgctcgaagcgaaagaa
gaagctctccgtcagaaaaccgaagccgaacgagacctctccaaacaacgagacgaaatc
cgcgaacgcgagaagtcactcgaccgccgcgaagaatcgatcgaacaacaagcgacccac
ttgcgcaagcaagagaacatggtcgaaaccacgcagcggcgtctcagcgagaaaatcgaa
gagaacgacaaacgctcgaccaacctcgaaagcatcatccgcgatcagcaggaacgcctg
caccggatgagcggactcaacgccgaagaagccaagagcgaactgctcaagctgctcgac
caacaacttcagtccgaaaccggcgcgatcattttgaagcaccagcgacggatggaagaa
gaagttcgccccatcgtccaagacatgctgctgacggccatgcagcggttcgccgcggcc
cacaccgcggagtcgacgaccagcacggtcgacatccccagcgatgaaatgaaggggcga
attatcggtcgtgaagggcgtaacatccgcagctttgaaaaggagaccggcgtcgacgtg
atcatcgacgatacgccaggcgtggtgatcgtcagcggtttcgatccggttcgccgcgag
atcgctcggcaatcgcttaacaaattgatcgccgacggccgcattcacccctcgcggatc
gaagaagtcgtcaaggaaacccagtccgacatcgaaacgacaattcggaagaagggggaa
gaagcgaccaccgaaatcaacgtgatgggactgcacccccgcctggtcgaaatgctggga
agacttcatttccgaaccagctacagccagaacgtgttgcgccacagcattgaagtcggt
ttcattgccggactactggccgaaatggttgggctcgatccgcaaattgcccggcgtgca
gggttgctgcacgatatcgggaaagcagcggaccatgaactggaaggggggcaccccaag
atcggtgccgacctcttgaagcgtcacggagaatcgcccgaggtggtccacgccgcgttt
ggtcatcacgacgagatcatcaccgagtacccttacacgatgctggtcgccacggcggat
gcttgcagtgcctcgcgtcctggggctcgccgtgagacgctcgaacggtacatcaaacgc
atggaagagctggagtcgattgccactggcttccacggagtcgaacaggccttcgccatt
caagcgggtcgcgaactgcgcgtgatcgcttcggccaaggaagtgaacgacgagatggct
gccaaaatctgtcgcgatatcgccaaagcgttcgaggaacagctgacgtatcccggcgaa
atcaaggtaaccatggtccgcgagtcccggttcacggaatttgctcgctaa
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