Bremerella volcania: Pan97_30610
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Entry
Pan97_30610 CDS
T06456
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bvo
Bremerella volcania
Brite
KEGG Orthology (KO) [BR:
bvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvo03016
]
Pan97_30610 (truB)
Enzymes [BR:
bvo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pan97_30610 (truB)
Transfer RNA biogenesis [BR:
bvo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pan97_30610 (truB)
Prokaryotic type
Pan97_30610 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QDU76016
UniProt:
A0A518C9V9
LinkDB
All DBs
Position
complement(3724673..3725551)
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AA seq
292 aa
AA seq
DB search
MHGILNINKPAGKTSRDVVNIIQRLMRPAKTGHAGTLDPLATGVLVCPVGHGTKLIEYIQ
RMPKTYEACFLLGRQSDTEDIEGNVQLLDDPPRPSRDEIEAVLLNYLGTIEQVPPAFSAL
KVAGKRAYDLARQGKEVELASREIEVYALEILAYDYPQLRMRIECGSGTYVRSLGRDIAR
DLGTEAIMSELMRTAIGCFQIDDAIHPDDQLSRGTLAAALQPTSLAVSQMPQVTVDHDKI
VRLAQGKLIEVDVDTASQEVAAMTQAGQLVAVLVPGKEGGWRTARNFANDYL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaattctgaatatcaataagccggccggtaagacgtcgcgcgacgtcgtgaat
atcatccagcggctcatgcgtccggcgaagacggggcatgctggtacgctcgacccgctg
gcgaccggggtgctggtttgcccagtgggacacggcacgaagctgatcgagtacattcag
cggatgcccaagacgtacgaggcctgctttcttttgggccggcaaagcgataccgaggat
atcgaaggcaacgtgcagcttttggacgatccgccgcgcccctcgcgtgacgagattgaa
gccgtgttgctcaactacctgggaacgatcgagcaggtcccgccggcgttctcggcgctg
aaggtcgccggcaagcgtgcgtacgacctggctcggcagggcaaggaggtggaactggcc
agccgcgagatcgaagtctacgcattggagatcctggcgtacgactatccccagcttcgc
atgcggatcgagtgcggcagtggaacgtatgttcgttctttgggacgggacattgcccgc
gatctgggaaccgaagcgatcatgtccgagcttatgcgcaccgcgatcgggtgcttccag
atcgacgatgcgattcacccggacgatcagttaagccgaggaacgcttgctgccgcgctg
cagcccacctcgctggccgtgtcccagatgccgcaggtaacggtcgatcacgacaagatc
gtgcggctggcccaggggaagctaatcgaggtggacgtggataccgcttcccaggaagtc
gccgcgatgacgcaggccggtcaactggtggccgtgcttgttcccggaaaagaaggcggg
tggcggacggctcgcaactttgccaacgactacctgtaa
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