Bremerella volcania: Pan97_41120
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Entry
Pan97_41120 CDS
T06456
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bvo
Bremerella volcania
Pathway
bvo03420
Nucleotide excision repair
bvo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pan97_41120 (uvrD1)
03430 Mismatch repair
Pan97_41120 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvo03400
]
Pan97_41120 (uvrD1)
Enzymes [BR:
bvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pan97_41120 (uvrD1)
DNA repair and recombination proteins [BR:
bvo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pan97_41120 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
Pan97_41120 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_16
STN
ResIII
DEAD
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QDU77052
UniProt:
A0A518CCW4
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All DBs
Position
5014362..5016653
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AA seq
763 aa
AA seq
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MTDYLFEGLTSSQREAVSHVDGPILVLAGPGSGKTRVVTHRIAHMLRSGVYSSQIVALTF
TNKAAEEMRSRVQRLAPESTVWVSTFHRFCARLLRAYSSLVGLESNYTIYDTSDSLQILK
RALQTEEISMSHATPEKVAKAISWAKNNMVLPERYEANSANAISSIVQDVYPEYQRQLRA
ANAVDFDDMLMLVAQMLQENPDLRAALDERFRYILVDEYQDTNLVQYLLVRSLSQQYPNL
GVTGDPDQSIYGWRGANLNNILDFEKDFDRVKVVRLEQNFRSTPNILSVADQLIGHNKRR
KKKSLFTDHAPGQPVRLLTYTTSHEEAQAIATRIATYVAQGKRRPRDFAIFYRVNALSRA
YEEALRQQGIPYMIVSGVEFYQRKEIKDVLAYAMLMNNPRDDVAFARIVNTPARGIGKST
ILKLQVHALDHGISMMDAAREAGMIDSLNKRAAVAVAKFVAIFDRISLKINEPVEEILGA
ILSETGLRAQYENSDDEEDLSRLENIDELLSSAREFDFQHPEDGTLEQYLEDKALVNETD
EFDTALDRVTLMTLHAAKGLEFPHVFMVAIEEGLLPHERSKDSDAQLEEERRLMFVGITR
AQQELELSTANQRDFRGRRMMTVPSKFLFELPREEMDFQAALGRYAPTSQQWDDIHEIPE
DDYSQIGKSGDISDDSPSHDPSPQTKMLMTAADMVKGPSSSKPKLNPDKFHQSMPVIHPT
YGLGKIIAMSGEGAKRTATVQFVTGQQNKFVLAYSELRPASSP
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattatttatttgagggactgaccagcagccaacgggaagccgtttctcatgtc
gacggaccaatcctcgtcctggccggccctggcagtggaaagacgcgcgtcgtcactcat
cgcatcgcgcacatgctgcgtagcggtgtctactcatcgcagatcgttgcgctcacgttt
accaataaggccgctgaagagatgcgatcccgcgtccagcggttggctcccgaaagcacc
gtctgggttagcaccttccaccgattctgtgcgcggctgctcagggcctattccagcctg
gtgggactcgagtcgaactacacgatctacgacacctccgactcgcttcaaattcttaag
cgtgctcttcagaccgaagaaatttcgatgtcgcacgcgacccctgagaaagttgccaag
gcgatcagttgggccaagaacaacatggttctgcctgaaagatacgaagcaaattccgcc
aacgcgatcagttcgatcgtgcaagacgtctacccggaataccagcggcagcttcgcgcg
gccaatgccgttgacttcgatgacatgctcatgctggtcgcccagatgctgcaggaaaac
cccgacctacgggcagcgctcgacgaacgctttcgctatatcctggtcgacgagtatcag
gacaccaacctggtgcagtacttgctcgtgcggtctctttcccaacagtatcccaacctg
ggtgttaccggagatcctgaccagtccatttacggctggcgaggagcgaacctgaataac
attctcgactttgaaaaagacttcgatcgggtcaaagtcgttcgcctggaacagaacttt
cggagtacgcccaacatcctttccgtggcggatcagcttattggtcacaacaagcggcgc
aagaaaaagtctctttttaccgaccatgcaccagggcaaccggttcgcttgttgacgtat
acgaccagtcacgaggaagcgcaagcgatcgcgacgcgtatcgcgacgtatgtcgctcaa
ggcaaacgtcgtccgcgtgactttgcgatcttctatcgcgtgaacgcactatcgcgtgct
tacgaagaagcccttcgccagcagggcattccttatatgatcgtcagtggcgtcgagttc
tatcagcgtaaagaaatcaaggacgtgctggcctacgccatgctgatgaacaatccgcga
gacgacgtggcgtttgcgcgaatcgtaaacacacctgcccgcggcattggcaagtcgacg
atcctcaagcttcaggtccacgcgttggaccatggcatttcgatgatggatgccgcccgt
gaggcaggcatgatcgactcgctgaataaacgagccgccgtcgcggttgccaagtttgtc
gccatcttcgatcgaatttcactgaagatcaacgagcccgtggaagagatcctcggggcg
atcttgagcgagacaggcctcagagcccaatacgaaaactccgacgacgaagaggacctt
tcccggcttgaaaacatcgacgagcttctttcatcggcccgggaattcgatttccagcac
cctgaagatggtaccctcgagcagtacttggaagataaggcactggtcaacgagaccgat
gaattcgacacggccctcgaccgcgtcacgctgatgacgcttcacgcggccaaaggactc
gagtttccccacgttttcatggtggccatcgaagaagggttgctgccgcacgaacgttcg
aaagattcagatgcacaactcgaggaagagcgacgcttgatgttcgtcgggatcacccgg
gcccagcaagagctagaactcagcaccgcgaaccagcgtgacttccgcggccgccgcatg
atgaccgtcccgagcaagttcctctttgagctcccacgcgaagagatggactttcaggcc
gccttggggcgatatgcgccgacatcccagcaatgggacgatatccacgagattcccgaa
gatgactacagccagattggcaaatcgggcgatatttctgacgactcgccaagccatgat
ccttcaccccagactaaaatgctgatgaccgcagccgacatggtgaaaggtccgagttcg
tcgaaaccgaaactgaatccggacaaatttcatcaatccatgcccgtcattcatccgacc
tacggattgggcaagatcattgccatgagtggcgaaggagccaaacgcacggctacggtt
caattcgtcactggccagcagaacaaattcgtcctcgcctattcggaactccgacccgcc
tcttccccttga
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