Bremerella volcania: Pan97_51000
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Entry
Pan97_51000 CDS
T06456
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bvo
Bremerella volcania
Pathway
bvo03030
DNA replication
bvo03430
Mismatch repair
bvo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pan97_51000 (dnaE)
03430 Mismatch repair
Pan97_51000 (dnaE)
03440 Homologous recombination
Pan97_51000 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvo03032
]
Pan97_51000 (dnaE)
03400 DNA repair and recombination proteins [BR:
bvo03400
]
Pan97_51000 (dnaE)
Enzymes [BR:
bvo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pan97_51000 (dnaE)
DNA replication proteins [BR:
bvo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pan97_51000 (dnaE)
DNA repair and recombination proteins [BR:
bvo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pan97_51000 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QDU78020
UniProt:
A0A518CFL6
LinkDB
All DBs
Position
6192106..6195645
Genome browser
AA seq
1179 aa
AA seq
DB search
MSQSFVHLHCHSHYSLLDGAGPIPKLVTRAKEHGMNALALTDHGNLHGALQFYNTCQANE
INPIIGYEAYIAPGSRLEKSGGMRGSNYHLTLLAQNKTGFKNLVKLASAAYLEGFYFKPR
IDKELLEKYHEGIICLSGCVSSEFSKIVMNGTNTAEVVKEAEETAGWFHKLFGDRYFIEI
MNNGLDIQKMQLEGAVDVAKRIGLPLVATSDTHYVDQSDAEAQDILLCVNTGKFRTDASR
MKMENDQFYLRSPDDMYASFPGLEDACSRSQEIADTVDIDLELGKRHFPSFKIPESKTAD
EYLRELCIQGLKERYEGNEEMLPGGELSEVVMARLDRELGVISRLGFPNYFLIVWDFVVE
ARKQNIPATARGSGVGALVCYALYLSHVCPIKYDLLFERFLDENRLEAPDIDIDFDKERR
GMVIKYVKDKYGEANVAQIGTFGTLAARAAIKDVGRAMGLPLDMVNEVTGMVPDQLGIKL
KDALAQSADMQSAYNANPDIKELLDLAMKIEGLARNVGTHAAAVVIADEPLTEYVPLCRV
SGKDDIITQWSMNDVEAAGLLKMDFLGLRNLTILRNAVDLIKKVRGEDLDILRLPLDDKD
TFDLLRRGETKGVFQLESGGIRDLLKRMKPDSFLDIIATNALYRPGPLEGGMVDDYIEVK
HGRKEAAYKHQVLKDVLEETNGVMVYQEQVMRILNRLGGIPLAKAYTCIKAISKKKESII
QANREQFLEGAQEKGLTKQEAQDFWDMIVKFAGYGFNKSHSTAYALVAYQTAYLKAHYPI
EFMAALLSGDISGRNFKTKDALVEHMEDAERMNIEVAPPDVNHSDEEFTVKDGKIVFALS
AIKGCGGGAAEAIVAAREKDGPFTDIFDFCERVDPSQCSKAAIETLIKAGAFDRLGGHRA
QYVTALDKAIQSGASAIADKRAGQKNLFAAVEDPAEEAKAVVLPDVQPWPDKETLGYEKE
CLGFYWSSHPLAEYKRKFEMCCSHSTANLTGLKDKTEVTMGGMVASIKLAHTRKARPGST
HTKYANFDLEDVDGGIRCILWPEDYAKLGESLRPDGVYIISGRLDRRGGDDEANLIVNEL
IPIEEVETRYARGVMVRVDQQVHGEDKLQTLVEIVRGYPGNCELKLLLVLEDGRQVALKS
QKGVDLSPEMRTRVDELLGEGNFELLLRRPASGGVRNSA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcgttcgtccatttgcattgccattcgcactacagccttttggacggagcg
ggtccgattcccaagctcgtgacgcgtgccaaagagcacggcatgaatgcgttggctttg
accgaccatggtaacctgcacggggcactgcagttctacaacacgtgccaagcgaacgag
atcaacccgatcatcgggtacgaggcctacatcgcgccgggcagccgcctggaaaaatca
ggcggtatgcgcggctcgaactatcacctcactttgctggcccaaaacaagacaggcttc
aagaacctggtgaagctggcctcggccgcctacctggaagggttctacttcaagccgcgt
atcgataaagaactattggagaaatatcacgagggaatcatctgcctgagtggctgcgtg
agcagcgagttctcgaagatcgtgatgaacggaaccaatacggcggaggtcgtcaaagaa
gccgaggaaacggctggctggttccacaagttgttcggcgatcgctacttcatcgagatc
atgaacaatggtctcgatatccagaagatgcaactggagggcgcggtcgacgttgccaag
aggatcggcctgccgctggtagccaccagcgacacgcactatgtcgatcagagtgatgcc
gaggcccaggatatcctcttatgcgtgaacaccggcaagttccgtacggatgcctcgcga
atgaagatggagaacgaccagttctatcttcgtagtccggatgacatgtacgcgagtttc
ccaggcttggaagatgcctgctcgcgtagccaggaaatcgccgacaccgtcgacattgac
ctggaactgggcaagcgccacttcccctccttcaaaatccccgaaagcaagacggccgac
gaatatctccgcgagctttgcattcaaggactcaaagagcgttacgaaggcaacgaagag
atgctgcctggcggcgagttgagcgaagtcgtcatggcccgcttggaccgcgaactgggg
gtgatcagccgacttggcttcccgaactacttcctgatcgtgtgggacttcgtggtcgag
gcccgcaagcaaaacattccggccacggctcgtggtagcggtgtgggtgcgctggtgtgc
tacgccctctatttgagccacgtctgtccgatcaagtacgacttgctgttcgagcgattc
ctggatgaaaaccgcctggaagcccctgatatcgatatcgacttcgataaagaacgtcgg
ggaatggtcatcaagtatgtgaaggataagtacggcgaagcgaacgtcgcccagatcggt
acgttcggtacgctagccgcccgggccgcgatcaaagacgtcggccgcgcgatggggctg
ccgctggacatggtcaacgaagtgaccggcatggtgcccgatcagctgggtatcaagctg
aaagatgcgcttgcccaaagcgcggacatgcagtccgcctacaacgcgaacccggacatc
aaggaactactcgatctggcgatgaagatcgaggggctggcacgcaacgtcgggacgcac
gcggccgccgtggtgatcgcggatgaaccactgaccgagtacgttccgctttgccgcgtt
tccggcaaagacgacatcatcactcagtggtcgatgaatgacgtcgaagcggccggtctg
ctgaaaatggacttcctcggtctgcgtaacttgacgatcctgcgaaacgcggtcgatcta
atcaagaaggttcgcggcgaagacctcgacatcttgcggcttcccttggatgataaagac
acattcgacctcctgagacgcggtgaaacgaagggtgtgtttcagctggaaagtggcggc
attcgcgacctgttgaaacgtatgaagccggacagcttcctcgacattatcgcgaccaat
gcgctctatcggcctggtccgctcgaaggcgggatggtcgacgactacatcgaggtgaag
catggtcgcaaggaagcggcttacaagcatcaagtgctgaaagacgtgctggaagagacc
aacggggtcatggtctaccaggaacaggtgatgcggatcttgaatcgcctgggtggcatt
ccgctggccaaagcgtacacgtgcattaaggcgatcagtaagaagaaagaatcgatcatc
caggccaatcgcgagcagttcctggaaggtgctcaagagaaaggcctcaccaagcaggaa
gcccaggacttctgggacatgatcgtcaagttcgccgggtatggtttcaataagagccac
tcaacggcttacgcactggtcgcctatcaaacggcctacctgaaagcgcactacccgatc
gagttcatggccgcgcttctttccggtgacatcagtggccgaaacttcaagacgaaggac
gcactggtcgagcacatggaagacgctgagcggatgaacatcgaagtggctccgcctgac
gtcaaccattccgatgaagagttcacggtgaaggacggcaagatcgtcttcgcgctaagt
gccatcaaaggttgcggtggcggtgcggcggaagcgatcgtcgcggcgcgcgagaaagac
ggtccgttcaccgacattttcgacttctgcgaacgcgtcgatccgtcgcagtgcagcaag
gcagccatcgaaacgttgatcaaggccggtgcattcgaccgccttggcgggcatcgggct
caatacgttacggcgctagacaaagcgatccagtccggcgcctccgcgatcgcggacaag
agggcggggcaaaagaaccttttcgctgccgtcgaagatcccgcggaagaagccaaagcg
gtcgtgcttcccgatgtgcagccttggccagacaaagaaacgctgggctacgagaaagag
tgtcttgggttctactggtcgagtcatcctctggccgagtacaaacgtaaattcgagatg
tgctgtagccatagcaccgcgaatcttaccggcctcaaagacaaaaccgaagtcaccatg
ggcggcatggtcgcctcgatcaaactcgcacacacgcgtaaggcgcggcccggaagcacc
cataccaagtacgctaacttcgacctggaagacgtcgatggcggtatccgctgcatccta
tggccggaagactatgccaagttgggcgagtccctcaggccggacggcgtttacatcatt
tcgggtcgactcgatcggcgaggcggtgatgacgaggcgaacctgatcgtcaatgagttg
attcccatcgaggaagtggaaacgcgatacgcgcgcggcgtgatggttcgggtcgaccag
caagtccatggcgaagataagctgcaaacgcttgtcgagatcgtgcgtgggtatcctggc
aactgcgaactgaagcttctgctggtgctggaagatggtcgtcaggtcgccctgaaaagc
cagaaaggagtcgacctttccccggaaatgcggacccgcgttgatgaacttcttggggaa
gggaacttcgaacttctgctcagacgccctgcttctggaggggtccgcaactcggcatag
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