Rossellomorea vietnamensis: FHE72_01650
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Entry
FHE72_01650 CDS
T07200
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bvq
Rossellomorea vietnamensis
Pathway
bvq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHE72_01650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvq03019
]
FHE72_01650
03009 Ribosome biogenesis [BR:
bvq03009
]
FHE72_01650
Enzymes [BR:
bvq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FHE72_01650
Messenger RNA biogenesis [BR:
bvq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FHE72_01650
Ribosome biogenesis [BR:
bvq03009
]
Prokaryotic type
rRNA helicases
FHE72_01650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
GRP
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHE59886
UniProt:
A0A6I6UNU1
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All DBs
Position
311844..313355
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AA seq
503 aa
AA seq
DB search
MTKFADLNLSASTLKSIKRMGFEEATPIQASTIPVGLEGKDIIGQAQTGTGKTTAFGIPM
IEKIDVKNPKVQALIIAPTRELAIQVSEELYRIGADKRARVLSVYGGQDIQRQIRAMKKN
PHIIVGTPGRLLDHIKRKTLNLENVETLVLDEADEMLNMGFIEDIESILETVPSTRQTLL
FSATMPDPIRRIANRFMSEPEVIKVKSKEVTVSNIEQYFTKVSEKEKFDTLSRLIDVQSP
ELAIVFGRTKRRVDELARALSIRGYLAEGIHGDLSQARRMTVLKKFKEGRIDILIATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGMSITFVTPREMGYLKIVEQTTK
KKMTALKPPSLNEALEGQQRLALEKLVEAAKESDLKDYYPLAEEFLGDHDPVQAVAAAIR
VLTKEPDTTPVEITEERPLPSRGGNRGGGNRGGYKGGARSGSRGGSSRSGGGNRGGGSRG
GDRNRTGGGRSQSSSKRKSYNNS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgactaagtttgcagatttaaacttaagcgcatctacgttgaaatcaatcaaacgtatg
ggctttgaagaagcaacaccaattcaggcaagtacgattccagtcggtttagaaggtaag
gatatcatcggtcaggcacaaacaggaacagggaaaacgacagcattcggtattccgatg
atcgagaagatcgatgtcaagaaccctaaagtccaggcccttatcattgcaccaacacgt
gaacttgcgatccaggtttctgaagaattataccgtatcggggctgacaagcgtgcccgc
gtcctatctgtatatggaggtcaggacatccagcgtcaaatccgtgcgatgaaaaagaac
cctcatatcatcgtcggtacaccaggtcgccttcttgaccatatcaaacgtaaaacactc
aaccttgaaaacgttgaaacattagtgcttgacgaagcagacgaaatgctgaacatgggc
ttcatcgaagacatcgaaagcatccttgagactgttccaagcacaagacaaacacttcta
ttctctgccactatgccggatccgatccgccgcattgcgaaccgtttcatgtcagagccg
gaagtcatcaaggtgaaatcaaaagaagtaaccgtttcgaatatcgaacaatacttcaca
aaagtcagcgaaaaagaaaaattcgatacactttcccgtttaatcgacgtacaatcaccg
gaacttgcgattgtattcggtcgtacaaagcgcagagtagacgaattagcgcgtgctctt
agcatccgcggctaccttgcagaaggtattcacggagatctttctcaagcccgtcgtatg
acggtccttaagaaattcaaagaaggacgcatcgatatcctgatcgcaacagacgttgct
gcccgtggattagatatctcaggcgtaacgcatgtttacaactttgatattcctcaagac
cctgaaagctacgttcaccgtatcggacgtacaggtcgtgcaggtaagaaaggtatgtcc
atcacttttgttacaccaagagaaatgggttacctgaagatcgttgaacaaacaacgaag
aagaaaatgacggcccttaagccacctagcttaaacgaagctcttgaaggtcagcaacgc
ctggcacttgagaaattagttgaagcggcgaaggaaagcgatcttaaagattactatcca
ttagcagaagaattccttggagatcacgatcctgttcaagcagtagctgcagcgatccgt
gtattgacgaaagaaccggatacgactcctgtagaaattacggaagaacgcccactacca
tcaagaggtggaaatcgtggcggcggtaaccgtggtggatacaaaggcggagcacgcagc
ggaagtcgcggtggatcttcgcgcagcggcggtggaaatcgcggaggcggaagccgtggc
ggagaccgtaaccgtactggcggcggcagatcacaatcttcaagcaaacgtaaatcttat
aacaattcttga
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