Rossellomorea vietnamensis: FHE72_03455
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Entry
FHE72_03455 CDS
T07200
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bvq
Rossellomorea vietnamensis
Brite
KEGG Orthology (KO) [BR:
bvq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvq03009
]
FHE72_03455 (rlmD)
Enzymes [BR:
bvq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FHE72_03455 (rlmD)
Ribosome biogenesis [BR:
bvq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FHE72_03455 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Cons_hypoth95
Methyltransf_31
Methyltransf_15
Methyltransf_25
MTS
UPF0020
Methyltransf_11
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
QHE60192
UniProt:
A0A6I6UND8
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All DBs
Position
703319..704719
Genome browser
AA seq
466 aa
AA seq
DB search
MKKQYAKKPQHNDVKIELKQQFPLTIKKIGINGEGVGFFKRKIVFVPGALAGEEVVVEVT
KVHPKFTEARIKKIRKKSPQRVKAPCPVYELCGGCQLQHLSYEGQLDAKRDILLQSLERH
TKLKLEDMDIRPTIGMDNPWHYRNKSQFQVGTQNGKAIAGLYSMNSNKLIDIDECIVQHP
LTNKVTNEIKRIINDFNIPVFDDKKKKPILKTIVTRVGFETGEVQVVLVTSEKKIPRKEL
LISEIQKRLPEVVSIAQNINPQKTALVFGDETIHLSGKESIEERLEEFTYELSARAFFQL
NPIQTSKLYNEAKKAAALTGEERVVDAYCGVGTIGLWLADGAKEIRGMDVIKEGIDDAKK
NAKKFGVEHAEYFVGGAETLMPKWKNEGWRPDVVVVDPPRTGCDNKLLDTLKEVKPKTFV
YVSCNPSTLAKDIDYLKKQYRVDYLQPVDMFPQTAHVEVVAKLVLK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcaatacgcaaaaaagccacaacataatgatgtgaaaatcgagctgaaacaa
cagtttcctctgaccataaagaaaatcggtatcaacggggagggagtcggtttcttcaag
cgtaagatcgtcttcgtaccgggagcccttgcaggggaagaagtggtcgtagaagtgacg
aaggtccacccgaaattcaccgaagcccgtatcaagaagatccggaaaaagtcaccacag
cgtgtgaaagcaccatgcccggtctatgagctatgcggaggctgccagcttcagcatctg
tcttacgaaggacagctagatgccaaacgcgacatccttcttcaatcccttgagcgccac
acgaagcttaagcttgaagatatggatatccgtccgacgatcggcatggataacccgtgg
cattaccggaacaaaagccagttccaggtcgggacgcaaaacggcaaggccattgcaggc
ttgtacagcatgaattccaacaagctgatcgacatcgatgagtgcatcgtgcagcacccg
ctcacgaacaaagtgacaaacgaaatcaaacggatcatcaacgacttcaacatccctgtt
tttgatgataaaaagaaaaagccgatcctaaaaacgatcgtaacgcgtgtcggatttgaa
acaggggaagtgcaggtcgtccttgtgacgtccgagaaaaaaatcccccgcaaggaattg
ttgatttcggaaatccagaaacgtcttcctgaagtcgtttccattgcccaaaacatcaat
ccgcagaaaacggccctcgtcttcggggacgaaacgattcatctttctggaaaagaaagc
atcgaagaacgcctggaagagttcacctatgaattgtccgcacgtgccttcttccagctg
aatccgatccagacgagcaagctgtataacgaagcgaagaaagcggcagcccttactggt
gaagaaagagtcgtcgatgcctactgtggagtcgggacgattggattgtggctagcagat
ggagcgaaagaaatccggggaatggacgtcatcaaggaaggaatcgatgatgcgaagaag
aacgcgaagaaattcggagtcgagcatgccgaatactttgtcggcggtgctgaaaccctc
atgccaaaatggaaaaacgaaggctggcgtcccgatgtcgtcgtggtggatccgccgagg
acgggctgcgacaacaagcttctcgatacgctgaaagaagtgaagccaaagacattcgtg
tatgtatcgtgcaacccgtcgacccttgcgaaggatatcgactatttgaagaagcagtac
cgggtggactatttgcagccggtggatatgttcccgcagacagcgcatgtggaggttgtc
gcgaagctggttcttaagtaa
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