Rossellomorea vietnamensis: FHE72_19990
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Entry
FHE72_19990 CDS
T07200
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bvq
Rossellomorea vietnamensis
Pathway
bvq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHE72_19990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvq03019
]
FHE72_19990
03009 Ribosome biogenesis [BR:
bvq03009
]
FHE72_19990
Enzymes [BR:
bvq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FHE72_19990
Messenger RNA biogenesis [BR:
bvq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FHE72_19990
Ribosome biogenesis [BR:
bvq03009
]
Prokaryotic type
rRNA helicases
FHE72_19990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
PrpR_N
Cas3-like_C_2
DUF4391
RDV-p3
RGS
Motif
Other DBs
NCBI-ProteinID:
QHE63894
UniProt:
A0A6I6ULC4
LinkDB
All DBs
Position
complement(3869602..3871041)
Genome browser
AA seq
479 aa
AA seq
DB search
MTPLNDFTTLGIQPKYVNALKEQSITEPTPIQSETIPVLLNGEDVIGQAQTGTGKTMAFL
LPMLAKIDPEKDEIQSLIVTPTRELAIQVTAELNQILSSVEDDIHVLAVYGGQDVEKQIK
RLKNKAIHIVIGTPGRLLDHVRRETVDFSNVRFLVLDEADQMLHIGFFDEVESIIRETPF
TRQTALFSATMSKDIRKIGKRYMNQPHNVQIREKEKIVQEIQQEIVETTDRQKLDALSQT
IHDVQPFLGIIFCRTKRRVSKLLGDLKARGFLVDELHGDLSQAKRENVMKKFRDAKLQLL
IATDVAARGLDVEGVTHVFNYDIPQDVESYIHRIGRTGRAGKDGLAITFVALKDKQDLEM
IEKGIGRSLPRRVVEVVSTKEIPNGPKGSIESAKDRREKNIQASKERKARSPRGGRSRTG
DKDGPSHSRRSKNEDSNPRRGGGESSGASRGKRSGSSGRNNSGNQRNSGSRSSSNRRGR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccattgaatgattttactaccttaggaattcaacctaagtacgtcaatgcatta
aaagaacaatccataacagaaccgacgccgattcaaagcgaaaccattccagtcttattg
aatggtgaggacgtgatcggacaggcacagaccggaacgggaaagacgatggcgtttctc
ctgcccatgcttgcgaaaatcgatccggaaaaagatgagatccagtctcttatcgtgact
ccgacgagggagcttgcgattcaggtaaccgctgaattgaatcaaatactatcttctgtg
gaagatgacatacatgtattagccgtttacggtggtcaggatgttgagaaacagataaag
cgactgaagaataaggcgattcatatcgtgatcggaacaccggggcgactgcttgatcat
gtgcgccgggagacggtcgatttttcaaatgttaggttcctcgtattggatgaagcggat
caaatgcttcatatcggcttcttcgatgaggtcgagtcgatcattcgtgagacaccgttc
acccgtcagaccgcactcttctctgcaacgatgtccaaggatatccgtaagatcgggaag
cgctatatgaatcagcctcataatgtgcagatccgggaaaaagaaaagattgtacaggaa
atccagcaggaaatcgtggaaacgacggatcgtcagaaacttgatgccctcagtcaaacg
atccatgacgtccagccgttcctcggcatcattttctgccggacgaagaggagggtcagc
aagctgctcggagaccttaaagcgagaggctttctggtcgatgaactccacggtgacttg
tcccaggcgaaacgggaaaatgtgatgaagaagttccgggacgcaaagctccagcttctt
atcgcaacggatgtggcggccaggggtcttgacgtggagggcgtgacccatgtgttcaac
tatgatatccctcaagatgtggaaagctacatccatcgaatcgggcgtacgggccgtgcc
ggtaaagacgggcttgccatcacctttgttgcactgaaggataagcaggatctggaaatg
attgagaaaggcattggacgttcattgccccgccgagtggtggaggtcgtttctactaaa
gaaatccccaatggccctaaaggatccattgaaagtgcaaaggatcgccgcgaaaagaat
atacaagcgagtaaggagagaaaagcaaggtctcctaggggcggcagatccaggacgggt
gacaaagatggtccgtcccacagtcgtagatccaagaatgaagactcgaatccccgccgc
ggtggtggtgaatcgtcgggtgcctcccgtggtaagcgaagcggctcgtctggaagaaac
aacagcggtaatcaacgaaatagtggcagcagatcctcttcgaatcgaagagggcgctga
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