Blastochloris viridis: BVIR_1660
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Entry
BVIR_1660 CDS
T04109
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bvr
Blastochloris viridis
Brite
KEGG Orthology (KO) [BR:
bvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvr03032
]
BVIR_1660
03400 DNA repair and recombination proteins [BR:
bvr03400
]
BVIR_1660
Enzymes [BR:
bvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BVIR_1660
DNA replication proteins [BR:
bvr03032
]
Prokaryotic type
DNA Topoisomerases
BVIR_1660
DNA repair and recombination proteins [BR:
bvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BVIR_1660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALK09439
UniProt:
A0A0H5BHQ1
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All DBs
Position
1814016..1816769
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AA seq
917 aa
AA seq
DB search
MRVVVVESPAKAKTINKYLGPGYEVVASFGHIRDLPAKDGSVDPDADFRMLWDVEPKAAK
RLADIARAVKGAERLILATDPDREGEAISWHVLEVLKEKRALKDVAVERVTFNAITKQAV
QDAMKHPRQIDQALVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIERFRSQEYWAIAVRLETPRGDVFEARLVGADGTKLGRLDIADGVSAEALTQALKAG
AYRVTSVEAKPVKRHPWPPFTTSTLQQEASRKLGFAPARTMQLAQRLYEGVEIAGETVGL
ITYMRTDGVQIADEAIAAARQVIGSEFGERYVPRAPRVYRTKAKNAQEAHEAIRPTDMAR
HPSSVARRLEPDQARLYELVWKRTIASQMESAEIERTTVDIVAAADGRKLDLRAVGSVVK
FDGFLKLYQEDRDDDGDDDDSRRLPAVSTGEALGCRGVEATQHFTEPPPRYSEASLVKRM
EELGIGRPSTYAAILAVLRERGYVRLDKKRLHPEDKGRLVTGFLESFFSRYVEYDFTASL
EEQLDRISNAELDWREVLRQFWQDFSAAVGGTKELRVSEVIDTLDEMLGPHFFPDLGDGI
DRRRCPGCGDGRLSLKLGKYGSFIGCSNYPECKYTRPLAVPGNGDGTAEGDGPRSLGEDP
DTGLDVTVRNGRFGPYVQLGDGEKPKRSSFPKGFDPATVDLDTALALLALPRAVATHPES
GKPILVGIGRFGPYVQHDKTYANLGADDDVLSIGANRAIDLIVVKETRGPGRGRTADAGR
ALGDHPALGGPVSVRAGRYGPYVNHGKVNATLPKDVTPDSVTLAQAVELLKARAEKLEAD
GPKPKRAKAAPKAKAPAKTETDDAAPKAKTPKAAAKTAKATKPKAAPKSKTAAKATAKAP
EKTTAKAKAKTATDTGA
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgtcgttgtcgagtcgccggccaaagcgaagacgatcaacaagtacctcggc
cccggttacgaggtcgtcgcttcgtttggccatatccgcgacctgcccgccaaggatggc
tcggtggatccggacgccgatttccgcatgctgtgggacgttgagcccaaggccgccaag
cgcctcgccgacatcgcgcgggcggtgaagggggctgaacggttgatcctcgccaccgac
ccggatcgcgagggtgaggcgatttcctggcacgtgctggaagtgctgaaggaaaagcgc
gcgctgaaggacgtcgcggtcgagcgcgtcaccttcaacgccatcaccaagcaggcggtg
caggatgccatgaagcatccgcgccagatcgaccaggccctggtcgacgcctacctcgcc
cggcgcgcgctcgactatctggtcggcttcaccctgtcgccggtgctgtggcgcaagctg
cccggtgcgcgctcggccggccgggtgcagtcggtcgcgcttcggctggtatgcgaccgc
gagttggagatcgagcggttccggtcgcaggaatattgggccatcgcggtgcggctggaa
acaccgcgcggcgacgtattcgaggcgcggctggtcggcgccgacggcaccaagctcggc
cgactcgacattgccgatggcgtcagcgccgaggccttgacgcaggcgctgaaagccggc
gcctaccgggtgacctcggtcgaggccaagccggtcaagcgccacccctggccgcctttc
accacctcgacgctgcagcaggaggccagccgcaagctcggatttgcgccggcccgcacc
atgcagctcgcccagcggctctatgagggcgtcgagatcgccggtgagaccgtcggcctc
atcacctatatgcgaaccgacggcgtccagatcgccgacgaggccatcgccgcggcgcgg
caggtgatcggcagcgagttcggcgagcgctacgtgccgcgggcgccgcgggtctaccgc
accaaggccaagaacgcgcaggaagcgcatgaggcgattcggccgaccgacatggctcgc
caccccagcagcgtcgcgcgccgcctcgaaccggaccaggcccgcctctacgagctggtg
tggaagcgcaccatcgccagccagatggaatcggccgagatcgagcgcaccacggtcgac
atcgtggcggcggccgacggccgcaagctcgatcttcgggcggtgggctcggtcgtcaag
ttcgacggcttcctcaagctctaccaggaggaccgcgacgacgacggcgacgacgacgat
tcccgccgcctgccggcggtgagcaccggcgaggccctgggctgccgcggcgtcgaagcg
acccagcatttcaccgagccgccgccgcgctattccgaggccagcctggtcaagcggatg
gaggaactcggcattggccgcccctcgacctacgccgccatcctcgccgtgctgcgggag
cgcggctatgtccggctcgacaagaagcgccttcatcccgaggacaagggacggctggtc
accggcttcctggagagcttcttctcgcgctacgtcgagtacgacttcaccgcctcgctg
gaggagcagctcgaccgcatctccaacgccgagctggactggcgcgaggtgctgcggcag
ttctggcaggacttttccgccgcggtgggcggcaccaaggaactgcgcgtctccgaggtc
atcgatacgctcgacgagatgctggggccgcacttcttccccgacctcggcgacggcatc
gaccgccggcgttgtccaggctgcggcgatggccggctgtcgctgaagctcggcaagtac
ggctcgttcatcggctgctcgaactatcccgaatgcaagtacacccgcccgctggcggtg
ccgggcaatggcgacggcacggccgaaggcgacggcccccgcagcctcggcgaagaccct
gacaccggtctcgatgtcacggtgcgcaacggccggttcggaccctacgtccagctcggc
gatggcgagaagcccaagcgctccagcttcccgaagggattcgatccggcaaccgtcgat
ctggataccgcgctggcgttgctggcgctgccgcgcgcggtggcaacccacccggaaagc
ggcaagccgatcctggtcggaatcgggcggttcggcccctacgtccagcacgacaagacc
tacgccaatctcggcgccgatgacgacgtgctgtcgatcggcgccaatcgcgccatcgac
ctcatcgtcgtcaaggagacccgcgggccgggacgcggtcgcaccgccgatgccggccga
gcgcttggcgaccaccctgccctcggcggcccggtgtccgtccgcgccggccgctacggt
ccgtacgtcaaccacggcaaggtcaatgccaccctgcccaaggacgtcacgcccgacagc
gtgacgctggcgcaggcggtcgagctgctgaaggcgagagccgagaagctggaagccgac
gggccgaagccgaagcgcgccaaggccgcgccgaaggccaaggccccggcaaagaccgag
accgatgacgccgcgcccaaggcgaagacgccgaaggcggcggcaaagaccgccaaagcc
accaagcccaaagccgccccgaaatcgaagacggcggccaaagcgaccgccaaagcgccc
gaaaagaccaccgcgaaagccaaggcgaagaccgcgaccgacacaggcgcctga
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