Blastochloris viridis: BVIR_1756
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Entry
BVIR_1756 CDS
T04109
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bvr
Blastochloris viridis
Pathway
bvr03410
Base excision repair
bvr03430
Mismatch repair
bvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BVIR_1756
03430 Mismatch repair
BVIR_1756
03440 Homologous recombination
BVIR_1756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvr03400
]
BVIR_1756
DNA repair and recombination proteins [BR:
bvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BVIR_1756
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BVIR_1756
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BVIR_1756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
SIS_2
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
ALK09530
UniProt:
A0A0H5BJE5
LinkDB
All DBs
Position
complement(1917996..1919798)
Genome browser
AA seq
600 aa
AA seq
DB search
MLDLSRRAFLNVTRSAAGRPWQARLDGAGETAAMAIAQRHGVPELLARVLAGRGVGLDEV
PAHLDPSISRLMPDPDTVTDMATAAARIAAACRRGEQVAVFGDYDVDGAASAAVMTLFLA
AAGLDPIVYIPDRLFDGYGPNVGAIRQLAERGAKLLVTVDCGTTSFEPLEEASRLGLDVV
VIDHHQATGALPPAVAVVNPNRDDDLSGLGYLAAVGLVFMATIATSRVLRQHGFWTAARP
EPDLIDLVDLVALGTVADVVPLKGLNRAYVAKGLLAMRRRTRPGLVALMDVARLEGPPKP
WHLGFLLGPRINAGGRIGDAALGARLLATADDVEARRIAAELDRLNGERQAIELATVAEA
EAEALAASGLGEGPPVAVVAGERWHPGVMGLVASRLKEKLGRPAIAIAWGAGGQGTGSGR
SIAGVDLGRAVRQAVEAGIAVKGGGHAMAAGLTIARDKLGALRAFLEEKLANEVAAARTR
DALYIDGALTAGGADASLIAAIERGGPFGAGNPEPVFALPSHTVAHAEPFGAQHIRVRLR
AQDGRMIDAVAFRVAGEPVGQTILKARGTSLHVAGTLSVDRWQARERVQLRIQDVAEPAR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacctgtcacgccgcgcctttctgaacgtcacgcggtcggccgccggccggccg
tggcaggcgcggctcgacggtgccggcgagaccgccgccatggccatcgcccagcgccac
ggcgtgcccgaactgctggcgcgggtgctggccgggcgcggcgtcggcctcgacgaggtg
ccggcccacctcgacccgtcgatcagccggctgatgcctgaccccgacaccgtcaccgac
atggcgaccgcggcggcgcgcatcgccgcggcctgccggcgcggcgaacaggtggcggtg
ttcggcgactacgacgtcgacggcgccgccagcgcggcggtgatgacgctgttcctcgcc
gctgccgggctcgaccccatcgtctatatcccggaccggctgttcgacggctacgggccg
aatgtcggcgccattcgccagctcgccgagcgcggcgccaaactgctggtcaccgtcgac
tgcggcaccaccagcttcgagccgctggaggaggccagccggctcgggctcgacgtggtg
gtgatcgaccaccatcaggccacgggcgcgctgccgccggcggtcgcggtcgtcaacccc
aaccgcgacgacgatctgtcggggctcggctacctcgcggcggtcgggctggtgttcatg
gcgacgattgcgacgtcgcgggtgctgcgccagcacggcttctggactgcggcgcggccc
gagcccgacctgatcgacctcgtcgacctcgtcgcgctcggcacggtggccgacgtggtg
ccgctgaaagggctcaaccgcgcctatgtcgccaagggcctcctcgccatgcggcggcgc
acccggccggggctggtggcgctgatggacgtggcgcggctggaggggccgccgaagccc
tggcacctcggcttcctgctcgggccgcgcatcaatgccggcggccgcatcggcgatgcc
gcgctcggcgcccggctgctcgccaccgccgatgacgtcgaggcgcggcgcatcgccgcc
gaactcgatcggctcaacggcgagcgccaggccatcgagctggccaccgtcgccgaggcg
gaagccgaagcgctggcggcgagcgggctcggcgaggggccgccggtggcggtagtggcc
ggcgaacgctggcaccccggcgtgatggggctggtggcctcgcgcctcaaggagaagctc
ggccgcccggccatcgccatcgcctggggggcgggcgggcagggcaccggctcgggccgt
tcgatcgccggcgtcgacctcggccgcgcggttcgacaggcggtcgaggccggcatcgcc
gtcaagggcggcggccacgccatggcggcgggcctgacgattgcgcgcgacaagctcggc
gcgctgcgcgcctttttggaggagaagctggcgaacgaggtagcggcggcgcgcacccgc
gacgccctctacatcgacggcgcgctcaccgccggcggtgccgacgccagcctgatcgcg
gcgatcgagcgcggcggcccgttcggcgccggcaatcccgagccggtgttcgcgctgcct
tcgcacaccgtcgcccatgccgagccgttcggcgcccagcacatccgggtgcggctccgc
gcccaggacggccggatgatcgatgcggtggcgttccgggtggcgggcgagccggtcggc
cagaccattctcaaggcgcgcgggaccagcctccacgtcgccggcaccttgtcggtcgac
cgctggcaggcccgcgagcgggtgcagctccgcatccaggacgtcgccgagccggcgcgg
tga
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