Blastochloris viridis: BVIR_1958
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Entry
BVIR_1958 CDS
T04109
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bvr
Blastochloris viridis
Brite
KEGG Orthology (KO) [BR:
bvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvr03009
]
BVIR_1958
Enzymes [BR:
bvr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BVIR_1958
Ribosome biogenesis [BR:
bvr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BVIR_1958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_25
Methyltransf_31
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
ALK09728
UniProt:
A0A0H5BDW2
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Position
2148405..2149652
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AA seq
415 aa
AA seq
DB search
MTTERLTIACLGHRGDGCAQTADGPLYVPFTLPGEEVEVQRVPGKDRADLVQVIRPSADR
VEPFCPHFGVCGGCALQHMAEPAYRAFKHGIVVSALADAGLDVEVADIVPAHGRGRRRAT
FHARSTAHDVLAVGFMAQRAHRVVPIDDCPILDPGLAGAVTACWAVAEALAATGKPLDIQ
VTATDGGLDVDVSGCSRLPERLRQTLVRMAGAQDLARLTLAGDLIVKRRPTTIAIGRASV
ELPPGAFLQATDAGDITLATLVREMAGKLAGKAAVLDLFAGVGTFALRLAETVRVTAVDG
DAAAIAALDAAVRATQGLKPLTTEARDLFRRPLVAAELKPFRVVVFDPPRQGAEAQARRL
ADSAVPAIGAVSCNPSTFARDAKLLVAGGYRLTRVVPVDQFAWSPHVEVVARFER
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgaacgcctgaccatcgcctgcttgggccatcgcggcgacggctgcgcccag
accgccgacggcccgctctacgtgcccttcaccctgccgggcgaggaggtcgaggtgcag
cgcgtgccgggcaaggaccgcgccgacctcgtccaggtgatccggccgagcgccgaccgc
gtcgagccgttctgcccccatttcggggtgtgcggcggctgcgcgctgcagcacatggcc
gagccggcctaccgcgccttcaagcatggcatcgtggtctcggcgctggccgacgccggc
ctcgacgtcgaggtggccgacatcgtgccggcgcacggccgcggccgccgccgcgccacc
ttccacgcccgcagcaccgcccatgacgtgctggcggtcggcttcatggcccagcgcgcc
caccgcgtggtgccgatcgacgactgcccgatcctcgatcccggcctcgccggcgcagtg
acggcgtgctgggcggtggccgaggcgctggccgccaccggcaagccgctcgacatccag
gtcaccgccaccgatggcgggctcgacgtcgacgtgagcggctgcagccggctgccggag
cgcctgcgccagacgctggtgcggatggccggcgcgcaggaccttgcacgcctcaccctg
gccggcgacctgatcgtcaagcgccgaccgaccaccatcgccatcggccgggcgtcggtc
gagctgccgcccggcgccttcctgcaggccaccgacgccggcgacatcacacttgccacc
ctggtgcgggagatggccggcaagctcgccggcaaggccgcggtgctcgacctgttcgcc
ggggtcggcacctttgccttgcggctggcggagacggtgcgggttaccgcggtcgacggc
gatgccgccgccatcgccgcgcttgacgccgcggtgcgcgccacccagggcctgaagccg
ctgacgacggaggcgcgcgacctgttccgccggccgctggtggcggccgagctgaagccg
ttccgggtggtggtgttcgatccgccgcgccagggcgccgaagcccaggccaggcggctg
gccgacagtgccgtgccggcgatcggcgcggtgtcctgcaacccgtcgaccttcgcccgc
gacgccaagctgctggtcgccggcggctaccggctgacgcgggtggtgccggtcgaccag
ttcgcgtggtcgccgcacgtcgaggtggtggcgcggttcgagcgctga
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