Blastochloris viridis: BVIR_3087
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Entry
BVIR_3087 CDS
T04109
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bvr
Blastochloris viridis
Brite
KEGG Orthology (KO) [BR:
bvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvr03016
]
BVIR_3087
Enzymes [BR:
bvr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BVIR_3087
Transfer RNA biogenesis [BR:
bvr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BVIR_3087
Prokaryotic type
BVIR_3087
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALK10847
UniProt:
A0A182D1E2
LinkDB
All DBs
Position
complement(3459160..3460104)
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AA seq
314 aa
AA seq
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MNAPRRPKRDVDGWLILDKPVGMTSTHAVSIVKRAFQAKKAGHAGTLDPLASGVLPIALG
EATKTVPMVMDGRKAYRFTVRWGVETDTDDAEGRAVATSEVRPDPAAVRALLARFTGEIL
QVPPRYSAIKIDGERAYDLAREGEEVVLEARPVIIDSLELVAVPDRDHAEFEAICGKGTY
VRALARDIGRVLGTHGHVVALRRTSVGPFHADTAAAIAPLEALFDAEPEARLAAIRALVQ
PVESALTQLACVPVSSNDAARLHRGQPVLLRGRDAPVMAGLVYVTAGGNLVALADVEQGE
LVPKRVFKLAGARL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgctccgcggcgccccaagcgcgatgtcgacggctggctgatcctggacaagccg
gtcggcatgacttcgacccatgccgtctccatcgtcaagcgggccttccaggccaagaag
gccggccatgccggcacgctcgacccgctcgcctccggcgtgctgccgatcgcgctcggc
gaggccaccaagacggtgccgatggtgatggacggccgcaaggcctaccgcttcaccgtg
cgctggggcgttgagaccgacaccgacgacgccgagggccgcgcggtcgcgacctcggag
gtccggcccgacccggctgcggtgcgggcgctgctggcgcgcttcaccggcgagatcctg
caggtgccgccgcgctattcggcgatcaagatcgacggcgagcgcgcctacgacctcgcc
cgcgagggcgaggaggtggtgctggaggcgcgcccggtgatcatcgacagcctggagctg
gtggcggtgcccgatcgcgaccacgccgagttcgaggcaatctgcggcaagggcacctat
gtgcgggcgctcgcccgcgacatcggccgcgtgctcggcacccacggccacgtcgttgcg
ctgcggcggacctcggtcggcccgttccacgccgacactgcggcggcgattgcgccgctc
gaggcgctgttcgacgccgaaccggaggcgcggctcgccgccatccgcgcgctggtgcag
ccggtcgaatcggcgctgacccagctcgcctgcgttccggtcagctccaacgacgccgca
cggctgcaccgtggccagccggtgctgctgcgcggccgcgacgccccggtgatggccggg
ctggtctacgtcaccgccggcggcaatctggttgcgctggccgacgtcgagcagggcgaa
ctggtgcccaaacgggtgttcaagctggccggagcgcggctctga
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