Blastochloris viridis: BVIR_3182
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Entry
BVIR_3182 CDS
T04109
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bvr
Blastochloris viridis
Pathway
bvr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BVIR_3182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvr03400
]
BVIR_3182
Enzymes [BR:
bvr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BVIR_3182
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BVIR_3182
DNA repair and recombination proteins [BR:
bvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BVIR_3182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ltn1_1st
IBR
Motif
Other DBs
NCBI-ProteinID:
ALK10939
UniProt:
A0A182D0W5
LinkDB
All DBs
Position
complement(3572126..3573010)
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AA seq
294 aa
AA seq
DB search
MSDGVMPELPEVETVRRGLQPAMEGAVFETIVLRRADLRVPFPARFAERLAGRRILALGR
RAKYLLADLDSAEVLVMHLGMSGSFRVEAAPVGAFHHPRGRDPVHDHVVFDLSTGARITY
NDPRRFGLMALVPRVGLADHPFFAGLGPEPLGNTFCAELLAAVARGRVTSLKALLLDQHA
VAGLGNIYVCEALHRAGLSPFNAAMTLADAAGQPAAGAARLVEAVRQVLEEAIAAGGSSI
SDHARPDGGLGYFQHAFRVYDREGQPCPTPGCRGVVRRVVQNGRSTFFCPVCQR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatggtgtcatgcccgaacttcccgaagtcgaaaccgtgcgtcgtggcctgcag
ccggcgatggagggcgcggtgttcgagaccatcgtgctgcgccgggccgatttgcgcgtg
ccgtttccggcccggttcgccgagcgcctggccggccggcgcatcctcgcgctcggccgc
cgcgccaaatacctgctcgccgacctcgattccgccgaggtgctggtgatgcacctcggc
atgtccggctcgtttcgcgtcgaggcggcgccggtcggggcgttccaccatccgcgcggc
cgcgatccggtccacgaccatgtggtgttcgacctctccaccggcgcgcgcatcacctac
aacgacccccgccggttcgggctgatggcgctggtgccgcgggtcgggctggccgaccac
ccgttcttcgccggcctcgggccggagccgctcggcaacaccttctgcgccgagctgctg
gcggccgtcgcgcgcggccgggtgaccagcctcaaggcgctgctgctcgaccagcacgcc
gtcgccgggctcggcaacatctatgtgtgcgaggcgctgcaccgcgccggcctgtcgccg
ttcaacgccgccatgacgctggccgacgccgcggggcagccggccgcaggcgcggcgcgg
ctggtcgaggcggtgcggcaggtgttggaggaggcgatcgccgccggcggctcatcgatc
tccgaccacgcccgcccggacggcggcctcggctatttccagcacgccttccgggtctat
gaccgcgagggccagccctgcccgacgcccggctgccgcggcgtggtgcggcgggtggtg
cagaacgggcgctcgacgttcttctgcccggtgtgccagcggtag
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