Blastochloris viridis: BVIR_3194
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Entry
BVIR_3194 CDS
T04109
Name
(GenBank) PD-(D/E)XK nuclease superfamily protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bvr
Blastochloris viridis
Brite
KEGG Orthology (KO) [BR:
bvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvr03400
]
BVIR_3194
Enzymes [BR:
bvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BVIR_3194
DNA repair and recombination proteins [BR:
bvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BVIR_3194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
YnaL
Motif
Other DBs
NCBI-ProteinID:
ALK10951
UniProt:
A0A0H5BA55
LinkDB
All DBs
Position
3585525..3588575
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AA seq
1016 aa
AA seq
DB search
MAPRVFTIPAGAPFLDTFVAALLAGEVVRGFPDPADPLSLARATLYLPTQRARRLIEAAF
LKAHGGNATLLPRLVALGEVDEDEFDLAGGLDLPPAIPKLSRRLLLAQLVAGFAGSPALK
LGDAAGLATAPAAALALADELAQLMDRMATGRVPWSGLDGLVPDELDRYWQISIRFLKAV
ATELWPAILNERGRLDPAVRRDLLARAETERLAAGNGGPVIVAGSTGSLPATRALIAAIA
RHPSGAVVLPGLDCDLDEASWRALDPGADGEPIPTHPQFGLQQLLAAIGIGREEVEPLAT
SAAGGRERLLSRALRPAATTDQWATPDPDLDPAAALARVALVVAAEPQEEALAVAVALRE
VVEEPGRTAALVTPDRALARRVAADLTRWNIRVDDSAGVPLADSGAGLLARALADAAAAA
LAPVPLAVLLNQPDARFGLTEAKLAARRAALELAVLRGPRPKAGTGGLTLALREVQDART
TLYRRDPRRTLLDSDFALAFDLVARLETGLGPVLALGGRAQPFAALLAAHRDAVEAAARH
PDGSGLAGADGDALMTWFDELAEAAADAAAMSLADYAEAVPALMRGVAVRTAFDEAARVR
ILGPLEARLVPLDRVVVSGLDEGRWPPDTSNDPWLSRPMRRALGLDLPERRIGLSAHDFA
QCFGAPEVVLTRARKAGGAPTVPARFLQRLAAVSGAAWHEVGARGERILATARLVDAAPP
AVPAPRPMPAPPLDLRPTQLSVTEVEDWIRDPYTIYARHVLRLSPLEPLDADVAAPARGT
IVHEALAEFLKVYPERLPPDALPRLLGCGRAAFARLDGFPDLVAVWWPRFQRVARWLVAV
ETERRSAGPVQSLVELGGKITVPGTGFLLTGRADRIDLTPDGAVVIDYKTGQPPSSPQVE
SGLAPQLPLEAAMVTLGGFKDVPAGTAIDGLVYVRVSGGEPPGEWKPVKPKAGAVADLAP
AALAGLARLVARFGEPTQGYQSLVRSEFTGRHGDYDHLARVAEWSATGGAGEEGEA
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcgcgtcttcaccattcccgccggcgcgccgtttctcgacaccttcgtcgcc
gcgcttttggccggcgaggtggtgcgcggctttcccgacccggccgacccgctgtcgctc
gcccgcgccacgctctacctgccgacccagcgcgcccgccgcctgatcgaggcggcgttc
ctcaaggcccacggcggcaacgccaccttgctgccgcgcctcgtcgcgctgggcgaggtc
gacgaggacgagttcgaccttgccggcggcctcgacctgccaccggcgatcccgaagctg
agccgccggctgctgctggcgcagctggtcgccggctttgccggcagcccggcgctcaag
ctcggcgacgccgccggccttgccaccgcgccggcggcggcgctggcgctggccgatgag
ctggcgcagctgatggaccgcatggcgaccgggcgggtgccgtggtcggggctcgacggc
ttggtgccggacgagctcgaccgctactggcaaatctcgatccgcttcctgaaggcggtc
gcgaccgagctgtggccggcgatccttaatgagcgcggcaggctcgaccccgcggtgcgg
cgcgacctgctcgccagggccgagaccgagcggctggcggcggggaacggcggtccggtg
atcgtggccggctcgaccggctcgcttccggcgacgcgcgcgctgatcgccgccatcgcc
cgccaccccagcggcgcagtggtgctgcccggcctcgactgcgacctcgacgaggcgtcg
tggcgcgcgctcgaccccggcgccgacggcgagccgattccgacccatccccagttcggc
cttcagcaattgctggcggcgatcggcattgggcgcgaggaggtcgagccgctggcgacg
tccgccgcgggcgggcgcgaacgactgctgtcgcgggcgctgcgcccggccgccaccacc
gaccagtgggcgacgcccgatcccgatctcgaccctgccgccgcgctggcgcgggtggcg
ctggtggtcgccgccgaaccgcaggaggaggcgctggcggtcgcggtggcgctgcgcgag
gtggtggaggagcccggccgcaccgccgctttggtgacgcccgaccgcgccctggcccgc
cgggtggcggccgacctgacgcgctggaacatccgggtcgacgattccgccggcgtgccg
ctggccgactccggcgccggcctgctcgcccgcgcgctggccgacgccgcagccgcggcg
ctggcgccggtgccgctggcggtgctgctgaaccagcccgacgcccgcttcggccttacc
gaagccaagcttgcggcgcggcgcgccgcgctggaactcgccgtgctgcgcgggccgcgc
cccaaggccggcaccggcggcctcaccctggcgctgcgcgaggtgcaggacgcccgcacc
accttatatcgccgcgacccgcgccgcacgctgttggactccgacttcgcgcttgccttc
gacctggtggcgcggctggagaccggccttggcccagtgctggcgctgggtggccgggcg
cagccgttcgcggcgctgctcgccgcccaccgcgacgcggtcgaggcggcggcacgccat
ccggacggctccggcctcgccggcgccgacggcgacgcgttgatgacatggttcgacgag
ctggccgaggcggcggccgacgccgcggcgatgtcgctggccgactacgccgaggcggtg
ccggcgctgatgcgcggcgtcgcggtgcgcaccgcgttcgacgaggcggcgcgggtgcga
atcctcggcccccttgaggcgcggctggtgccgctcgaccgggtggtggtgtcgggcctc
gacgagggccgctggccgcccgacacctcgaacgacccctggctcagccggccgatgcgc
cgcgcgctggggctcgacctgccggagcgccgcatcgggctatcggcgcacgatttcgcg
cagtgcttcggcgcgccggaggtggtgctgacgcgggcgcgcaaggccggcggcgcgccg
accgtgccggcgcgcttcctgcaacggctcgccgcggtgtcgggcgcggcctggcacgag
gtcggcgcgcgcggcgagcgcatcctcgccaccgcccggctggtcgacgccgccccgccc
gccgtgccagcgccgcggccgatgccggcgccgccgctggacctcaggccgacgcagctc
agcgtcaccgaggtcgaggactggattcgcgacccctacaccatctacgcccgccacgtg
ctgcgcctcagcccgctcgagccgctcgacgccgacgtcgccgcgcccgcccgcggcacc
atcgtgcacgaggcgctggcggagttcctcaaggtctatcccgagcggctgccgcctgac
gccctgccacggctgctcggctgcggccgcgccgcgttcgcccgcctcgacggctttccc
gatctcgtcgcggtgtggtggccgcgctttcagcgcgtcgcgcgctggctggtggcggtg
gagaccgagcgccgcagcgccggcccggtgcagagcctggtcgagctgggggggaagatc
acggtgccgggcaccggcttcctgctgaccggccgcgccgaccgcatcgacctgacgccg
gacggcgcggtggtgatcgactacaagaccggccagccgccctccagcccccaggtcgag
agcgggcttgcgccgcaactgccgctggaggcggcgatggtgacgctgggcggcttcaag
gatgtgccggccggcaccgccatcgacggcctggtttatgtccgcgtctcgggcggcgag
ccgccgggcgagtggaagccggtgaagcccaaggccggggcggtggccgacctcgctccc
gccgcgctggccggcctggcgcggctggtggcgcgcttcggcgagcccacgcaaggttat
cagtcgttggtgcggtccgaatttacgggccgccacggcgactacgaccatctcgcccgc
gtcgccgaatggtcggcgaccggcggcgccggcgaggagggcgaggcatga
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