Blastochloris viridis: BVIR_42
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Entry
BVIR_42 CDS
T04109
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bvr
Blastochloris viridis
Brite
KEGG Orthology (KO) [BR:
bvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvr03021
]
BVIR_42
Transcription machinery [BR:
bvr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BVIR_42
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_31
KORA
Motif
Other DBs
NCBI-ProteinID:
ALK07860
UniProt:
A0A0H5B9K6
LinkDB
All DBs
Position
38977..39849
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AA seq
290 aa
AA seq
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MARVMGVRQRFVKAAMNAPFLGREEEHDLAVRWKAVGDQDALHRLASAHIRLVIAIAARF
KHYNLPMADLIQEGHVGLLEAAARFDPEREVRFSTYATWWIRAAIQDYVLRNWSIVRGGT
SSAQKALFFNLRRMRARLAQRGEDISTSQLYQNIAETIGVSVNDVAMMDARLSGHDMSLN
APMSDPDSAASSERQDFLVWDGPAPDEQAGEEIDRVRRAKWLRAALAVLSEREMRILRER
RLVDNASTLEALGSRLGISKERVRQIETRAIEKLRQALDAQQPDARTAMI
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcatgggggttcgccagcgtttcgttaaagctgccatgaatgcgccgttc
ctcggccgcgaggaggagcacgatcttgccgtgcgctggaaggcggtgggcgatcaggac
gcgctgcaccgcttggcgtcggcgcacatccggctggtgatcgcgatcgccgcccgcttc
aagcactacaatttgccgatggccgacctgatccaggaaggacatgtcggcttgctggag
gccgcggctcggtttgaccccgaacgcgaggtgcggttttcgacctacgccacttggtgg
atccgcgcggcgatccaggactatgtgctgcgtaactggtcgatcgtgcgcggcggcacc
tcgtcggcacaaaaggcgctgttcttcaaccttcgccgcatgcgggcacgcctcgcccag
cgcggcgaggacatctcgacctcgcagctctaccagaacatcgccgagaccatcggcgtg
tcggtcaacgacgtcgcgatgatggacgcgcggctgtcgggacacgatatgtcgctcaac
gcgccgatgtccgacccggacagcgcggcgtcctcggagcggcaggactttctggtgtgg
gacggtccggcgccggacgagcaggccggcgaggaaatcgaccgggtgcggcgggccaag
tggttgcgggcggcgctggcggtgctgtcggagcgcgagatgcgcatcctgcgcgagcgg
cgactggtcgacaacgcctccaccctggaggcgcttggctcccgccttggcatctccaag
gagcgcgtccgccagatcgagacccgcgccatcgagaagctgcggcaggcgctcgacgcc
cagcagcccgacgcccgcaccgcaatgatctga
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