Blastochloris viridis: BVIR_636
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Entry
BVIR_636 CDS
T04109
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bvr
Blastochloris viridis
Brite
KEGG Orthology (KO) [BR:
bvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvr03021
]
BVIR_636
Transcription machinery [BR:
bvr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BVIR_636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_11
Sigma70_r4_2
HTH_7
GntR
KORA
HTH_10
HTH_28
HTH_25
PgaD
Motif
Other DBs
NCBI-ProteinID:
ALK08431
UniProt:
A0A0H5B7Y3
LinkDB
All DBs
Position
complement(696218..697114)
Genome browser
AA seq
298 aa
AA seq
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MAQIPSLTAEGGLSRYLDEIRRFPMLEPQEEYMLAKSWREHGDTDAAHKLVTSHLRLVAK
IAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPDKGFRLATYAMWWIKAAIQEYILRSWSL
VKMGTTAAQKKLFFNLRKAKGRISAIEDGDLRPDQVKLIAKRLGVEEREVVEMNRRLAGD
ASLNAPLRDDGEGGSEWQDWLVDESANQETVLVESEEFDSRRAALKGAMDVLNPRERRIF
EARRLAENPITLEELAEEFGVSRERVRQIEVRAFEKVQEAVLARVRALEQPRTLAPTA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcccagataccatctctcactgccgaaggcggcctgtcgcgctatctcgacgaaatc
cgccgcttcccgatgttggagccgcaggaagagtacatgctcgccaaatcctggcgcgag
catggtgacaccgacgccgcccacaagcttgtcaccagccacctgcgattggtggccaag
atcgccatgggatatcgcggctatggcctgccgatctccgaagtggtgtccgagggcaac
gtcggactgatgcaggcggtcaaacgcttcgagcccgacaagggctttcgtcttgccacc
tacgcaatgtggtggatcaaggcggcgattcaagaatacatcctgcgttcgtggtcgttg
gtgaaaatgggcaccaccgcggcgcagaagaagctgttcttcaacctgcgcaaggccaag
ggacgcatctcggcgatcgaggacggcgacctcaggcccgaccaggtcaagctgatcgcc
aagcgcctcggcgtcgaggagcgcgaggtggtcgagatgaaccgccgcctcgccggcgac
gcctcgctcaacgcgccgctgcgcgacgatggcgagggcggctccgaatggcaggactgg
ctggtcgacgaaagcgccaaccaggaaaccgtgctggtcgagagcgaggagttcgactcc
cgccgcgccgcgctgaaaggcgcgatggacgtgctgaacccgcgcgagcgccgcatcttc
gaggcgcgccgcctggccgagaacccgatcacgctcgaggagctggccgaggagttcggc
gtcagccgcgagcgcgtccgccagatcgaggtccgcgcgtttgagaaggtgcaggaagcg
gtgctggcgcgggtgcgcgcgctggaacagccgcgcacgctggcgccgaccgcctga
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