Barnesiella viscericola: BARVI_01095
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Entry
BARVI_01095 CDS
T02986
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bvs
Barnesiella viscericola
Pathway
bvs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BARVI_01095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvs03400
]
BARVI_01095
DNA repair and recombination proteins [BR:
bvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BARVI_01095
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BARVI_01095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
AAA_21
DnaJ_CXXCXGXG
AAA_23
AAA_25
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AHF11674
UniProt:
W0ER70
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All DBs
Position
255241..258060
Genome browser
AA seq
939 aa
AA seq
DB search
MKAEDQIEVYGARVHNLKNIDVKIPRNSLTVITGLSGSGKSSLAFDTIFAEGQRRYIETF
TAYARNMLGGMERPDVDKITGLSPVISIEQKTTNKNPRSTVGTTTEIFDFLRLLFARAGE
AYSYLSGEKMVRYTEEKIISLILDRYQGRRTYILAPLVRNRKGHYKELFEQVRRKGYLTV
RIDGELREITHGMKLDRYKNHSIELVVDKLVVDKDDERRLQESVKTAMKQGDGQLMILDA
DTQELRHYSRTLMDPKTGLSYSEPAPHNFSFNSPQGACPKCKGLGYVNIIDREKIIPNDE
KSIYEGGIVPLGKYKNTLIFWQIAAICEKYGDSLKTPIKDLSEEALDDILNGTDERLQIK
NESLGSSNYFLSFDGLIKYIEVQQQSDASSQAQKWAGQFVTTTVCPSCEGHRLNREALHY
RIAGKNIAELADMDISELYEWVNQVEYELSPQQRQIAVEILKEIRSRLHFLVDVGLDYLC
LNRASATLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNTRLINSLKELRDMGN
SVIVVEHDKEMMLAADYIVDLGPRAGRLGGNIVFAGTPQEMLKTNTLTAQYLNGEKKIEY
SPQRRPGNGKKLILSGATGNNLKNVTVEFPLGKFICVTGVSGSGKSSLINGTLQPILSQK
FYRSLQASLPYDRIEGLENIDKVVTVDQSPLGRTPRSNPATYTGVFADIRNVFVELPEAK
IRGYKPGRFSFNIAGGRCEVCGGNGYKTIEMNFLPDVLVPCEACHGKRYNRETLEVRFKG
KSIADVLDMTINQAVEFFENIPSIISKIKVLQEVGLGYIKLGQPSTTLSGGESQRVKLAA
ELSKRDTGKTLYILDEPTTGLHFEDIRVLLSVLNRLVDKGNTVIVIEHNLDIIKCADHII
DMGPEGGRNGGYVLATGTPEEICKYDTATARYLKEELNG
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagaagatcagatagaggtctatggtgcccgtgtgcacaacctcaaaaacata
gatgtcaaaattccccggaacagcctgacggtcattaccggactgagcggtagcggcaaa
tcgtcgttggccttcgacaccatctttgccgagggacagcgtcgctacatcgagaccttt
acggcctatgcccgcaacatgctcggcggtatggaacggcccgatgtggacaagattacc
gggttgagtcccgtaatctccatcgaacagaagacaaccaacaagaatccgcgttcgacg
gtggggacaaccaccgagatattcgatttcctgcggttgctttttgctcgggcaggagag
gcttactcttacttgtcgggcgaaaagatggtgcgatataccgaagagaagattatctca
cttatcttggaccgctaccaaggtcgccgcacctacatactggctccgttggtgcgcaac
cgcaagggccactacaaggagttgttcgagcaggtgcgtcggaaagggtatctcaccgtc
cgtatcgacggcgaactgcgcgagataacccatggcatgaaactcgaccgctacaaaaat
cacagcatcgagctggtggtcgacaaactggtggtcgacaaggacgacgaacgccggttg
caggagagtgtaaaaacagccatgaaacagggtgacggccagctgatgatactcgacgca
gacacacaggagctgcgccattacagccgcaccctcatggaccccaagacgggcttgtcg
tatagcgaaccggctccgcacaacttctcgttcaactcgccgcaaggagcctgtcccaag
tgcaagggattgggatatgtcaatatcatcgaccgtgagaagattatccccaacgacgag
aagtcgatttacgaagggggaatcgttccgctgggtaaatacaagaacacgctgatattt
tggcaaatcgcagctatctgcgagaaatacggcgacagcctgaaaactcccatcaaggat
ctctcggaagaggcgctcgacgatattctgaacggcaccgacgaacgtttgcaaatcaag
aacgagtcgttgggctcctccaactatttcctgtcgttcgacgggctgatcaaatacatc
gaggtacagcagcagagcgacgcctcgtcgcaagcccaaaagtgggcggggcagtttgtc
acgaccaccgtgtgccccagttgcgaaggtcatcggttgaaccgagaggcgctgcattac
cgcattgccggtaagaacatcgccgaactggccgacatggacatctcggaactgtatgaa
tgggtcaaccaggtagagtacgagttgtcgccccagcagcgccagattgcggtcgaaatc
ttgaaagagattcgtagccgcctgcacttcctcgtcgatgtagggttggactatctgtgc
ctcaaccgggcctcggccaccttgtcgggaggtgagagccaacgcatacgattggctacc
cagatagggtcgcaactggtcaatgtgctctatattctcgacgagcccagtatcgggtta
caccaacgcgacaacacccgactcatcaactccttgaaagagttgcgcgatatgggtaat
tcggtcatcgtcgtagaacacgacaaggagatgatgctggctgccgattatatcgtcgat
ttgggccctcgggccggtcgcttgggcgggaacatcgtctttgccgggacaccccaggag
atgctcaaaaccaataccctcacagcgcaatacctgaacggggaaaagaaaatcgaatat
tcaccccaacgacgtccgggcaacggtaaaaaacttattctatcaggtgccacaggcaat
aacctcaaaaatgtgacggtcgagttcccgctgggcaaattcatctgcgtaacgggcgta
tcgggtagcggtaaatcgagcctcattaacggaacgctgcaaccgatactcagccaaaag
ttctatcgttcgctgcaagcctcgttgccttacgaccgaattgaaggactggaaaatatc
gacaaggtggtgaccgtcgaccagtctccactgggacgcacaccgcgttccaatccggct
acctatacgggtgtctttgccgacatacgcaatgtctttgtcgagctgcccgaggctaaa
atccgtggctataaaccgggacgcttctcgttcaacatcgcgggcggacgctgcgaggta
tgtggcggtaacggctacaagaccatcgagatgaatttcttgcccgatgtgctcgtacct
tgcgaggcttgccatggcaaacgctataatcgggagactctcgaagtgcgcttcaaaggg
aagtcgattgccgatgtactggatatgaccatcaatcaggcggtcgaatttttcgaaaat
ataccctcgattatctccaaaataaaggtgctgcaagaggtgggactcggatacatcaag
ctgggacaaccctcgacaaccttgtcgggaggcgagagtcagcgggtgaaactggctgcc
gagctctccaaacgcgatacggggaagactctctatatactcgacgaacccactaccgga
ttgcatttcgaggatatacgggttttgttgtcggtactgaatcgactggtcgataagggg
aatacggtgattgtcatcgagcataacctcgacatcattaaatgtgccgaccacattatc
gacatggggccggaagggggacgaaatggcgggtacgtattggctacaggaactcccgaa
gagatttgcaagtacgacacggctaccgctcgctacttgaaagaggaattgaacggatag
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