Barnesiella viscericola: BARVI_01150
Help
Entry
BARVI_01150 CDS
T02986
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bvs
Barnesiella viscericola
Pathway
bvs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BARVI_01150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvs03019
]
BARVI_01150
03400 DNA repair and recombination proteins [BR:
bvs03400
]
BARVI_01150
Enzymes [BR:
bvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BARVI_01150
Messenger RNA biogenesis [BR:
bvs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BARVI_01150
DNA repair and recombination proteins [BR:
bvs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BARVI_01150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
NirdL-like_HTH
RPA_C
Motif
Other DBs
NCBI-ProteinID:
AHF11683
UniProt:
W0EQ95
LinkDB
All DBs
Position
complement(271546..273453)
Genome browser
AA seq
635 aa
AA seq
DB search
MHEIIYEILQKYWGYRQFRPMQEEIITSLLDGHDTLGLMPTGGGKSLTFQVPTLCREGLC
LVITPLVALMKDQVDNLRDRGIRAAYIHAGMSRREMVVTFDNCLYGRFKFLYISPERIDT
ELFTARIQGLPVSLIVVDEAHCISQWGYDFRPAYLKIAQIRHTLPHVPVLALTATATPIV
ADDIQKKLDFHDGRVFRTGFARPNLSYVVRSCEDKMQQLLRILHRVPGSAVVYVRNRKHT
KEVAEELNRAGISADYYHAGLGQEEKNEKQRKWKVDETRVMVSTNAFGMGIDKPDVRVVV
HLDMPNSPEEYFQEAGRAGRDGTRAYAVLLYSRRDKANLHKRLTEEFPDKEFVLKVYERV
GNFLEIALGCGMDSIYEFNLKRFCTTFNYATTPVLSALKILTISGYIEFIEETDTLSRVM
MLVHKEELYHLRDTDPATDRVLQCLLRSYTGLFADYVFIHEDLLAQRLGACQQEVYEALL
KLNRLHVLHYIPRRRTPYIVYTRERMEPRYVQITREAYEDRRQRMADRIESMITYATSTR
CRQQMLLEYFGEKADYECGCCDNCIEHRKREQASAQKPEVIARAIQQFIGNDCVSRDRIA
AALPYPEDEVIEALRFLRDEGFIVCEDDIHYKNKT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaaatcatctacgaaatattgcaaaagtactggggttaccgccagttccggccc
atgcaagaggagattatcacttcgctgctcgacggacacgacaccttgggactcatgcct
accggcgggggtaaatcgctcacctttcaggtgcctaccctctgtcgcgaagggctctgc
ctcgtcattacccctctcgttgccttgatgaaagaccaggtcgacaacctgcgcgaccgg
ggcatacgggcggcttatatccatgccggcatgtcgcgccgcgagatggtcgtcaccttc
gacaactgcctctacgggcgattcaagtttctctacatctcgcccgagcgcatcgatacc
gagctgttcaccgcccgcattcaggggctgccggtctcgctaatcgtggtcgacgaggcc
cactgcatctcgcaatggggatatgacttccgccctgcctacctgaaaatagcccagata
cggcacaccctgccccacgttcccgtgctggccctcaccgccacggcaactcctattgta
gccgatgatatacagaagaagctcgactttcacgacggtcgggtattccgcaccggcttc
gcccgtcccaacctctcgtatgtggtgaggtcgtgcgaggacaagatgcagcaactgctg
cgtatcctccatcgggtacccggcagcgccgtcgtctatgtgcgcaaccgcaagcacacg
aaagaggtagccgaagagttgaaccgggccggcatatcggccgactactaccacgccggt
ctgggacaggaggagaagaacgagaaacagcgcaaatggaaggtcgatgaaacccgggtg
atggtctcgaccaacgccttcggtatgggcattgacaaacccgatgttcgggtggtcgtg
catctggacatgcccaactcgcccgaagagtattttcaagaggcgggtcgggccggacgt
gacgggacccgtgcctatgccgtactgctctattctcgtcgcgacaaggccaacctgcac
aagcggctcactgaggagtttcccgacaaagagtttgtcttgaaggtctacgaacgggtg
ggtaactttctcgaaatagcactcggctgcggcatggactcgatttatgagttcaacctg
aaacggttctgcaccaccttcaactatgcgactactccggtactcagcgcgctgaaaatt
ctcaccatatcgggctacatcgaatttatcgaagagactgacaccctttcgcgggtaatg
atgctggttcataaagaagaactctaccacttgcgcgacaccgacccggccaccgaccgc
gtgttgcaatgcctgttgcgctcctataccgggctttttgccgactatgtgtttatccac
gaagatttgcttgcccaacggctcggtgcctgtcagcaagaggtctacgaggccttgttg
aagctgaaccgtctgcacgtgctccactacataccgcggcgacgcacgccctatatcgtc
tacacccgcgaacgcatggagccccgctacgtgcaaatcacccgcgaagcctatgaagat
aggcgacagcgcatggccgaccgcatcgagagtatgatcacctatgccacttcgacccgc
tgtcgtcaacagatgttgctcgaatacttcggtgagaaggccgactacgagtgcggctgc
tgcgacaactgcatcgagcacaggaaacgggagcaagcctcggctcaaaagcccgaggtg
atagcccgggccatacaacagttcatcggcaacgactgcgtgagccgcgaccggatagcc
gccgcgctaccctaccccgaggacgaggtgatcgaagccctgcgcttcctgcgagacgaa
ggttttatcgtctgcgaagacgatattcactataaaaacaaaacataa
DBGET
integrated database retrieval system
