Barnesiella viscericola: BARVI_02470
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Entry
BARVI_02470 CDS
T02986
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bvs
Barnesiella viscericola
Pathway
bvs03420
Nucleotide excision repair
bvs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BARVI_02470
03430 Mismatch repair
BARVI_02470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvs03400
]
BARVI_02470
Enzymes [BR:
bvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BARVI_02470
DNA repair and recombination proteins [BR:
bvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BARVI_02470
MMR (mismatch excision repair)
Other MMR factors
BARVI_02470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AHF11893
UniProt:
W0EQS8
LinkDB
All DBs
Position
569367..571721
Genome browser
AA seq
784 aa
AA seq
DB search
MEEDFLNDLNEQQRDAVLYTEGPELVIAGAGSGKTRVLTYKIAHLLQMGYPPYRLLALTF
TNKAANEMKNRIAEVVGIETASRLWAGTFHSIFSRILRANADRLGYRHDFTIYDASDSLS
LIKSIIKEMQLDDKVYKPSTVQSIISNAKNALIEPHVYAKNRELIEMDTRSKRPLICEIY
RIYRHRCFVSGAMDFDDLLLNTNILFRDHPDVLQHYRDLFAYILVDEYQDTNFAQHLIVS
QLGKEHNRICVVGDDAQSIYSFRGANIHNILGLSKEYPGLKIFKLERNYRSTQNIVNTAN
SLIAKNKEQIPKQIFSQKEQGNKVKVISAYSDFEEGFIVSNRIAELRLTTHCRYNDFAIL
YRTNAQSRTLEEALRKRNIPYRIYGGTSFYQRKEIKDAIAYFRLTINPNDEEALKRVINY
PTRGIGNTTLTKLIDRAHESGLSIWNVLDDPKGNGVEVNSGTLNKLQGFKELIESFRLAA
TRQTTAELAETIVRQSGIMRDITAERTPENISRQENIEELLNGVQEFCTLRQESGEENTT
LSDFLAEISLATDQDNGDEAEQDKVTLMTVHASKGLEFKQVFIVGVEENLFPSSMSQESE
REIEEERRLLYVAITRAEENCTLTYALTRYRNGQTVSSPPSRFLKELDPRYVDMPAQARQ
EQPLEERPWRNSFAGEWGRKPFRRDDSDDSRTPAPRPFTAPAPAKRLTRIESRPASDNSS
APQTSATTAAGAIVVGSRICHARFGNGTVSAIEGTGDNSKITVEFDNVGRKQLLLKFAKF
TLIE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaagattttttgaacgacctgaacgagcagcaacgcgatgccgtactctatacc
gagggacccgagctggtgattgccggtgccgggtcgggaaagactcgggtgcttacctac
aagattgctcacctcttgcagatggggtatcccccctaccggctgctggcactgaccttt
accaacaaggcggccaacgaaatgaaaaaccgtattgccgaggtggtgggcatcgagacg
gcttcgcgattgtgggcgggcacgttccactcgattttctcgcgcatcctgcgggccaat
gccgaccggttgggctatcgccacgacttcaccatatacgatgcctccgactccctctcg
ctcatcaagagcatcatcaaggagatgcaactcgacgacaaggtgtacaagccttcgacc
gtgcagtcgattatctcgaacgccaagaatgccctcatcgagccgcacgtgtatgccaag
aaccgggagttgatcgagatggatacccgctcgaagcgtccgctcatctgcgagatttac
cgcatctaccgccaccgctgtttcgtgtcgggggccatggactttgacgacctgttgctc
aacaccaatatcctgttccgcgaccaccccgacgtgttgcagcactaccgtgacctcttt
gcctacatcttggtcgacgagtaccaggataccaactttgcccaacacctcatcgtgagc
cagttgggcaaggagcacaaccgcatctgcgtggtgggcgacgatgcccagagcatctac
tccttccggggggccaatatccacaacattctgggattgagcaaagagtacccggggttg
aaaatcttcaagctcgaacgcaactaccgctctacccaaaacatcgtcaacacggccaac
agcttgattgccaaaaacaaggagcagattcccaaacagatattctcgcaaaaggagcag
ggcaacaaggtgaaggtaatcagtgcctactccgacttcgaggagggctttatcgtctcg
aaccgcattgccgaactgcgcctcaccacccactgccgctacaacgactttgccatactc
taccgcaccaacgcccagtcgcgcacgctggaagaggcactgcgcaaacgcaacattccc
taccgcatctacgggggtacctcgttctaccagcgcaaggagattaaagatgccatcgcc
tacttccgcctcaccatcaaccccaacgacgaggaggcgctcaaacgggtcatcaactac
cccacccggggcatcggcaacaccaccctcaccaaactcatcgaccgggctcacgagagt
ggactcagcatctggaacgtgctcgacgaccccaaggggaacggtgtcgaggtgaacagc
ggcacactcaacaagttgcagggattcaaggagcttatcgagagcttccgcctcgcagcc
acccgtcagaccacggccgaactggccgagaccatcgtgcgccagtcgggcatcatgcgc
gacattaccgccgagcgcacccccgagaatatcagtcggcaagagaatatcgaggaactg
ctgaacggtgtgcaggagttctgcacactgcgtcaggagtcgggcgaagagaacaccacg
ctctccgactttctggccgagatttcgctggcgaccgaccaggacaacggcgacgaggcc
gagcaggacaaggtgacactgatgaccgtacacgcctcgaagggtttggaattcaagcaa
gtattcatcgtgggtgtggaggagaacctcttcccctcgtcgatgagtcaggagagcgag
cgcgaaatcgaggaggagcggcggctgctctacgtagccatcacccgcgccgaggagaac
tgcaccctcacctatgccctcacccgctaccgcaacggccagacggtgtcgtcacctccc
agccggttcctcaaagagctcgacccgaggtatgtcgacatgcctgcccaagcccggcag
gagcagcccctcgaagagaggccgtggcgcaactccttcgccggcgaatggggtcgcaag
cccttccgccgcgacgacagcgacgacagccgcaccccggcgcctcgtcccttcaccgcc
ccggctccggccaagcggctcacccgcatcgagagccgtcccgcgagcgacaactcctcc
gcgccgcaaacctcggccacaaccgccgccggagccatcgtggtgggcagccgcatctgc
cacgcccgattcggcaacggcaccgtgtcggccatcgagggcacgggcgacaacagcaaa
ataaccgtcgagtttgacaacgtgggccggaaacagctcctgctcaaattcgccaagttc
accctgatcgaataa
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