Barnesiella viscericola: BARVI_04235
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Entry
BARVI_04235 CDS
T02986
Name
(GenBank) RNA polymerase sigma70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bvs
Barnesiella viscericola
Pathway
bvs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BARVI_04235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvs03021
]
BARVI_04235
Transcription machinery [BR:
bvs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BARVI_04235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AHF12127
UniProt:
W0EMW9
LinkDB
All DBs
Position
1025460..1025999
Genome browser
AA seq
179 aa
AA seq
DB search
MTSITEDNDFSNIFRTSKNGFIQFAYSYLGNMQDAEDVVMESYIQYWENKDKETFQATNI
KGYIFTIIRNKCIDVLEERKHLLQKNEELYNHMIGEIELNISSLKGCDPSELFTSEIEKI
VHSTIETLPNRTREIFYERYLEQKPYKTIAENFGITIKGVEFHISKSLNILRKSLKDYL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgattacagaagataatgacttttccaacatttttaggacgtctaaaaatgga
tttatccaatttgcatactcctacctggggaacatgcaagacgccgaagatgtagtgatg
gagtcgtatatccaatattgggaaaacaaagacaaggagaccttccaagccaccaatata
aaagggtatattttcaccatcatcaggaacaaatgtatcgatgttctggaagagcgaaaa
cacctgttacaaaagaatgaagagctgtacaaccacatgatcggtgaaatcgagctcaac
atctcttcgctgaaaggctgtgacccctcggaacttttcaccagcgaaatcgaaaaaatt
gtacacagtaccatcgaaaccttgcccaatcgcacacgagaaatattttacgagcgatac
ctcgaacagaaaccctacaaaacaattgccgaaaatttcggcatcacgattaaaggcgta
gagtttcacatttcaaaaagcctgaatatcttacgaaaaagcctcaaagactatctataa
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