Barnesiella viscericola: BARVI_05300
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Entry
BARVI_05300 CDS
T02986
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
bvs
Barnesiella viscericola
Pathway
bvs00300
Lysine biosynthesis
bvs00470
D-Amino acid metabolism
bvs00550
Peptidoglycan biosynthesis
bvs01100
Metabolic pathways
bvs01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BARVI_05300
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BARVI_05300
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BARVI_05300
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BARVI_05300
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bvs01011
]
BARVI_05300
Enzymes [BR:
bvs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
BARVI_05300
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
BARVI_05300
Peptidoglycan biosynthesis and degradation proteins [BR:
bvs01011
]
Precursor biosynthesis
Amino acid ligase
BARVI_05300
Racemase
BARVI_05300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
DUF3195
HHH_5
LpxK
Motif
Other DBs
NCBI-ProteinID:
AHF12286
UniProt:
W0ET56
LinkDB
All DBs
Position
1296014..1298482
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AA seq
822 aa
AA seq
DB search
MNYTTTQIATIVKAQKREYQDHIITALLTDSRSLTFPEETLFFALVTERNDGHRYIKELY
RKGVRDFVVEHPIPGEEEMEGANFIVVKDTLAALQQLAAAHRRRFNIPVIGVTGSNGKTT
VKEWLYQLLQPDYNTVRSPRSYNSQIGVPLSVWQIGPKTEMAIFEAGISQPDEMVHLEEI
IKPTLGLITNIGEAHQEGFQTIQQKCLEKLILLKACDCIIYDGDNSLICECVEKLCFGCR
EIAWSRKDRDKPLYISKITKGNDSTKIDYTYLQYHSSFTIPFVEDASIENAIHCLAVMLY
YNRPPEVIAERMARLTPVAMRMEVKEGINNCLIINDSYNSDINSLTIALDFQNRRAAAKG
MRRTLILSDIYQTGLPPASLYRKVADIILHKGIERLIGIGPVISDNAYLFNLEKEFYPST
ESFLSQFDPADFHNELILIKGAREFHFELISETLELKQHETILEVNLDAIVHNYNLFKSK
LHPQTKIICMVKAFGYGAGSYELAKTLQDRGADFLAVAVADEGAELRKAGITMPILVMNP
EMSSFRTLFSYYLEPEIYSFELLKAIIAEGEKLGLAGYPVHIKIDSGMHRLGFEEKDMPQ
VVDMLNDQTVVLARSVFSHFAGSDEPRFDEFSHQQIDTFTRCADYLQQHSKHKILRHILN
TAGILRFPEYQMDMVRLGIGLYGVSPIEDSCGIETVSTLKTTILQIKSLPAGETVGYGRK
GVLTRDSRIAAIPIGYADGLDRHLSNGKGCVVVNGKRAPIVGNICMDVCMIDVTDIDCQP
GDRVEIFGEQLPVTEIAETLGTIPYEILTSVSTRVKRIYYRE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaactacacgactacccaaattgctacaatcgtcaaagcccagaaaagggaatatcaa
gatcatatcatcaccgcgctgctcaccgacagccggtcgctcaccttccccgaggagacg
ctcttctttgccctcgtgaccgagcggaacgacggccaccgctacatcaaggagctctat
cgcaaaggagtgcgcgactttgtggttgagcaccccattcccggcgaagaggagatggag
ggggccaacttcatcgtcgtcaaggatacgctcgccgccctgcaacaactggctgcggct
catcgtcgccggttcaatatcccggtcatcggggtcacgggcagtaacggcaagactacc
gtcaaggagtggctctaccagctgctccaacccgactacaacaccgtgcgttcgccccgc
agctacaactcgcagattggtgtaccgctctcggtgtggcaaatcgggcccaagaccgag
atggccatcttcgaggccggtatctcccaacccgacgagatggtacatctcgaagagatt
atcaaacccacgctgggactgattaccaacatcggcgaggctcaccaggaggggttccag
acaatccagcaaaagtgcctcgaaaagctcatcttgctgaaagcctgcgactgcattatc
tacgacggcgacaacagcctcatctgcgagtgtgtcgagaagctctgcttcggctgtcgc
gagattgcctggtcgcgcaaggaccgcgacaaaccgctttacatctccaagattaccaaa
gggaacgactcgaccaagattgactatacctacctgcaataccacagcagcttcaccata
ccctttgtcgaggacgcctcgatcgagaacgccatacactgcctggccgtgatgctctac
tacaaccgtccgcccgaggttatcgccgagcgtatggcccgcctcacgccggtagccatg
cgtatggaggtgaaggagggcatcaacaactgcctcatcatcaacgacagctacaactcc
gacatcaactcgctcaccatcgctctcgacttccagaaccgccgcgctgctgccaaaggc
atgcgccgcaccctcattctctccgacatctaccagacgggacttccccctgccagtctc
taccgcaaggtggccgacatcattctgcacaagggcatcgagcggcttatcggcatcggg
ccggtcatctcggacaatgcctacctcttcaacctcgaaaaggagttctacccctcgacc
gagagcttcctctcccagttcgatccggccgatttccacaacgagctgatattgatcaag
ggggcccgcgagttccatttcgagctcatctccgagaccctcgaactgaaacagcacgag
acgattctcgaagtcaacctcgacgccatcgttcacaactataacctgttcaagtcgaaa
ctgcacccccagaccaaaatcatctgcatggtcaaagccttcggctacggggccggatcc
tacgaactggccaagacgctgcaagaccgcggagccgactttctggccgtggccgtagcc
gacgaaggggccgaactacgcaaggcgggcataaccatgcctattctggtgatgaacccc
gagatgagcagcttccgcaccctgttcagctactacctcgagcccgagatatacagcttc
gagctgttgaaagccatcattgccgaaggcgagaaactggggctggccggctatcccgta
cacatcaaaatcgactcgggcatgcaccggctcggctttgaagagaaggatatgccccaa
gtagtcgacatgctcaacgaccagacggtcgtgctcgcccgctcggtattctcgcacttt
gccggtagcgacgagccccgcttcgacgagttctcgcaccaacagatcgacaccttcacc
cgttgtgccgactacctgcaacagcactccaaacacaagattctgcgccacatactcaac
acggccggcatcctgcgattccccgaataccagatggacatggtgcggctgggcatcggg
ctctacggcgtctcgcccatcgaagactcctgcggcatcgagacagtgagcaccttgaag
accaccattctccaaatcaagtcgctcccggccggcgaaaccgtgggctacggccgcaag
ggggtactcacccgcgactcacgcatcgccgccattcccatcggctatgccgacggtctg
gaccgtcatttgagcaacggcaaagggtgtgtagtggtgaacggcaagcgagcccccatc
gtgggcaacatctgcatggacgtatgcatgatcgacgtgaccgacatcgattgccagccg
ggcgaccgggtcgagatattcggcgaacagctgcccgtgaccgagattgccgagaccctc
ggcaccataccctacgagattctcacctcggtatcgacccgcgtaaaacgcatctattac
cgggagtaa
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