Barnesiella viscericola: BARVI_05470
Help
Entry
BARVI_05470 CDS
T02986
Name
(GenBank) endoglucanase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
bvs
Barnesiella viscericola
Pathway
bvs00511
Other glycan degradation
bvs00600
Sphingolipid metabolism
bvs01100
Metabolic pathways
bvs04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
BARVI_05470
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
BARVI_05470
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
BARVI_05470
Enzymes [BR:
bvs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
BARVI_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_3
CHB_HEX_C_1
BNR_2
Fn3_assoc
Laminin_G_3
BNR
GEVED
BNR_assoc_N
CHB_HEX_C
Motif
Other DBs
NCBI-ProteinID:
AHF12313
UniProt:
W0ES12
LinkDB
All DBs
Position
complement(1336923..1339850)
Genome browser
AA seq
975 aa
AA seq
DB search
MHLAMVINRADNTVSLYRDGQQGNWKQNAALNSWTVVNNNPIYLGCGSTTGTPDHLMDGK
LANVRFWSKALTAAEVAADMTATVGPDTEALIAAYDFANISGLTVPDISGHGHDATLSGF
DPVGSDVAIYSATSKADTNFTGRGNTNEIASSMAVAITGQEGTYTFGNLSLDLTGTTNVQ
DITAIKVYMTDQNSFDPRKAGEAELLGTCTPTENTVECALTGESPVGTKYLWVTFDVSET
AAEGNRVAIKPTMLDEKAVSAITTGSREILLGRTLLFAPGDYGSVAYRIPGIITAWDGSL
VAITDKRKYNQSDIPEDIDIVVRRSTDNGKTWSEPVTMAQGTGQYHGYGDAAIVRTNTEN
ELLCIFIGGNGLFASTTSNRIRTYISRSTDNGQSWSAPQDITDQIFRGERASWTASFCAA
GNGLKTRNGVLMFVAAMRHDSGNTLYNHVVYSNDNGVTWNVSNCAMVGGDESKVVELNDG
RILMSVRRQSKGARYYTISDNVPSTTEAVSWTQKNTSTVSSWAEMVEPACNGDIVRYTST
LDGYDKDRILHTLPNDGANRQNLTVFLSYDEGRTWSVKKSICPTGSAYSSIAILEDGTIG
VYAEENYNTDKYSTYFMNFSLDWLTNQADTYIEPGVEAVAAPVFSVPAGYYTEAQTLEIT
TATEGAQIYYTLDGSTPTANSTLYEDPITLSETVTVNAIAMKEGMSNSVMTSAEYTFLTE
WEHPTGTIHDTESRYVTSATTTGAVEDLNYTLSSKPSTVFIDTQSAFTVEAGQEFTLRVQ
CTEQMIWCHAVLFADWNRDFDFDDEGEMITKVGIDSYEDTDQTLSANGNTMMKDFSVNIT
VPAEAKVAETRLRIQFSDAWHNKSAHEHTAMDNIDKGGCYDFVMNIEPSSDLPSGIDDDR
TAHTMVYPTLFTEGVTLFATGNGEARIFDLAGRLLSRVEVSEGENYIEGTTLPAGSLIMV
VTTDEGTKSFRVVKK
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcacttggccatggttatcaaccgggccgacaatacggtatctctttatcgcgatggc
cagcagggcaattggaagcaaaatgctgcacttaattcgtggaccgtggtcaacaacaac
cccatttatttgggctgtggttctactactggcacacccgatcatctgatggacggtaag
ttggccaatgttcgtttttggagcaaggccttgactgccgccgaggtggccgccgatatg
actgctacggtcgggcctgataccgaagccttgattgccgcttacgactttgccaacata
tcgggtttgactgtccccgacatcagcggccatggtcacgatgctaccctttcgggattc
gatcccgtgggctcggacgttgccatttattcggctacctccaaagccgataccaacttt
accggacgcggaaataccaacgagattgcctcttcgatggccgttgctattaccgggcaa
gagggtacctatacgttcggtaacctttcgctcgatttgaccggtacgaccaacgtacag
gatattaccgctatcaaggtatacatgaccgatcaaaattcgttcgatccccgcaaggcc
ggtgaggctgaacttttgggaacttgtacccccaccgaaaacaccgtagagtgtgcgctt
actggcgaaagtcccgtaggaaccaagtatctgtgggtaactttcgatgtgtccgagacg
gctgccgagggtaaccgcgtagccatcaagcccaccatgctcgacgagaaagccgtgagc
gccataaccacgggcagccgtgaaattctgttgggccgtaccctgcttttcgcccccggc
gattatggttcggtggcttaccgtatccccggcatcattacggcttgggacggttcgctt
gtagccattaccgacaaacggaaatataaccagagtgatattcccgaggatattgatatc
gtggtgcgccgcagtaccgacaacggtaagacatggagcgagcctgtaactatggcacaa
ggtacgggccagtatcatggctatggcgacgccgctatcgtaagaaccaataccgagaat
gaattgctctgcatcttcatcggtggcaacggactgtttgcctcgacgacttccaaccgt
atcagaacctatatctcgcgcagtaccgacaatggccaatcgtggagtgccccccaagat
attaccgaccagattttcagaggcgagcgtgcttcgtggactgcttcgttctgcgctgcc
ggtaacggtttgaaaacccgcaacggtgtgctgatgtttgtggctgccatgcgtcacgat
tcgggtaatacactttacaatcatgtggtttattcgaatgataacggtgtgacatggaat
gtatcgaattgtgctatggtaggcggtgacgaatcgaaagtggtagagctgaacgacggc
cgcatcttgatgagtgtccgtcgccagtcgaagggtgcccgctattacacgatttcggac
aatgtaccctcgacgaccgaggccgttagctggactcaaaaaaacacctctaccgtcagc
tcgtgggccgagatggttgagcccgcctgcaacggcgatatcgtaagatacacttcgacg
ctcgacggttatgacaaggaccgtatcctccacacgttgcccaacgatggtgccaatcgg
cagaacctcaccgtgttcctgagctacgacgaaggacgtacctggtcggtgaagaagtcg
atttgtcctaccggatcggcctattcgtcgattgctattctcgaagacggtacgatagga
gtctatgccgaggagaattacaataccgacaagtacagtacctattttatgaacttctcg
ctcgactggctcaccaatcaggccgatacctatattgaacctggtgttgaagccgtagcc
gctcctgtattctcggttcctgccggatattatactgaggctcagaccttggagataact
actgccaccgaaggtgctcaaatctactatacgcttgatggttctactcccacggccaac
tcgacgctgtatgaggaccccatcaccctgagtgagaccgttaccgtcaatgccatcgcc
atgaaagagggtatgtcgaacagtgtgatgacctcggccgagtacaccttcctgaccgaa
tgggaacaccccacgggaacgattcacgatacagaatctcgttatgtgacctcggccacg
acgaccggtgccgttgaggacctcaactatacgctttcgtccaaaccgtcgaccgtattt
atcgacacccagtcggcctttacggtagaagccggtcaggagtttaccctgcgtgtacag
tgtaccgagcagatgatttggtgccatgccgtactctttgccgactggaatcgcgacttc
gatttcgacgatgaaggtgagatgattaccaaggtaggtatcgactcttatgaggacact
gatcaaactttgtcagcaaacggtaatacgatgatgaaagacttctcggtcaatattacg
gtgcctgccgaagccaaagtggccgagacccgtttgagaatccagttctccgatgcctgg
cacaacaagtcggctcacgaacacaccgccatggacaacatcgacaagggtggttgctac
gatttcgtgatgaacatcgagccttccagcgacctgccttcgggtatcgacgatgatcgt
accgcacacacgatggtctatcccacgctctttaccgagggtgtaaccctgtttgccaca
ggcaatggcgaagctcgcatcttcgacctggccggccggttgttgagccgtgtcgaggtg
agcgaaggtgagaactacatcgagggaaccactctccccgccggtagcctgattatggtt
gtgacgacggacgaaggcaccaagagtttccgcgtagtgaagaaataa
DBGET
integrated database retrieval system
