Barnesiella viscericola: BARVI_05920
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Entry
BARVI_05920 CDS
T02986
Name
(GenBank) ligand-gated channel protein
Organism
bvs
Barnesiella viscericola
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
PEGA
Motif
Other DBs
NCBI-ProteinID:
AHF12388
UniProt:
W0ES73
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Position
1437400..1439727
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AA seq
775 aa
AA seq
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MVSGRVSSTEGGAVQAVDFATVYLKGGHSGGTTDEQGRYRLKTRPGDYTLVVSAIGYEPF
EKPISLKRGEHLNLDITLTSKTQTLDEVTVVATGVNRVKRSAYNAVAVDTREMQNSTKNL
SDALAKAPGMKLRESGGVGSDMQLMLDGFSGKHVKVFIDGVPQEGVGSSFGLNNIPISFA
DRIEIYKGVVPVGFGTDAIGGVINIVTNKQRRNWYLDAAYSYGSFNTHKSYLNFGQSFKS
GLTYEINLFQNYSDNNYWVDADHVEQWNADGSSIITDEVFRVRRFNDTYHNEAVVAKVGV
TDKPWADRLMLGFTYSQMYKEIQTGVRQHTVFGEKHRRGHSLMPSLEYRKRDLLTRGLDL
TLTANYNRNVTHNIDTASYRYNWLGERRLNTNGRGEQSEQYARAYNDNWNATATLNYRIG
RAHTLTFNHVWNAFHRTNTSLLTGAEIKDEFAKETRKNISGLSYRLMPSDRWNLSVFGKY
YHQYVSGPVATDDKGTDYVLVERTVQQFGYGAAGTYFVLPGLQAKLSYERACRLPTIEEM
FGDEDLESGQVDLRPEKSHNVNLNLSYARTIGPHSFYIEGGLIYRNTRDYIQRNIQDLSG
GKENATYTNYGKVVTKGYNLSARYSLGRWLSLGGNFSQMDVRDMEPYQIGSTGNSTPNLT
YKARMANVPYLFADSDINLYWHDLGRKGNLLTLTYDNQYLHSFCYNSEVIGTNSSDYMIP
DQFSHNLSISYSLHNGRYNLAFECRNFTDEKLYDNFSLQKAGRAFYGKIRVHFGD
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atcgtctcgggccgggtctcgtcgaccgaggggggagccgtccaagcggtcgactttgcc
accgtctacctcaaaggagggcactcgggcggcacaaccgacgaacagggccgataccgt
ctcaaaacccgacccggcgactacacgctggtggtctcggccatcggctacgagcccttc
gagaaaccgatttcgctgaaacggggcgaacacctcaacctcgacatcaccctcacttcc
aagacccagaccctcgacgaggtgacggtagtcgccaccggggtgaatcgggtgaagcgc
tcggcctacaacgccgtggccgtcgatacccgcgagatgcagaactcgaccaagaacctg
agcgacgctctggccaaggccccgggcatgaaactgcgcgaatcgggcggcgtgggctcc
gacatgcaactcatgctcgacggattcagcggcaagcacgtgaaggtattcatcgacggc
gtgccgcaggagggggtgggcagctccttcgggctcaacaacatacccatcagctttgcc
gaccgtatcgaaatctacaagggggtcgtacccgtcggcttcggcaccgacgccatcggc
ggagtcatcaacatcgtcaccaacaaacagcgccgcaactggtatctcgatgccgcctac
tcctacggatcgttcaacacccacaagtcgtatctcaatttcgggcagagtttcaagagc
ggtctcacctatgaaatcaacctcttccagaactactccgacaacaactactgggtcgat
gccgaccacgtggagcagtggaacgccgacgggtcttcaatcatcaccgacgaggtattc
cgggtgcgtcgtttcaacgacacctaccacaacgaggccgtcgtggccaaggtgggtgtg
accgacaaaccctgggccgaccgcctcatgctgggcttcacctactcgcagatgtacaaa
gagatacaaaccggcgtgcggcaacacaccgtcttcggcgagaaacaccgccggggccat
tcgctcatgccctcgctcgaataccgcaagcgcgacctcctcactcgcggactcgacctc
accctcacggccaactacaaccgcaacgtgacccacaatatcgacaccgccagctaccgc
tacaactggctgggagagcgtcgcctcaacaccaacggccggggcgaacagagcgaacag
tatgcccgggcctacaacgacaactggaacgctaccgccaccctcaactaccgcatcggg
cgggcccacaccctcaccttcaaccacgtgtggaacgcctttcaccgcaccaacacgtcg
ttgctcaccggggccgaaatcaaggacgagtttgccaaggagacccgcaaaaacatctcc
gggctctcctaccggctcatgccctccgaccgctggaacctctcggtcttcggcaaatat
taccaccagtatgtatcgggccccgtagctaccgacgacaagggtaccgactacgtactg
gtagagcgcaccgtgcagcagttcggctacggggccgcgggcacctatttcgttctgcct
gggttgcaggcgaaactctcctacgaacgagcctgccgcctgcccaccatcgaggagatg
ttcggcgatgaagacctcgaaagcggacaggtcgacctccgccccgagaagagccacaac
gtcaacctcaacctcagctacgcccgcaccatcggaccacactcgttctacatcgagggc
ggcctcatctaccgcaacacccgcgactatatccaacgcaacattcaagacctgagcggg
ggcaaggaaaatgccacctacaccaactacggcaaggtggtgaccaaaggctacaacctc
tcggcccgctactctctgggtcgctggctgagtctgggtggcaacttctcgcagatggac
gtgcgcgacatggagccttaccagatcggcagcaccggcaactccacccccaacctcacc
tacaaggcccgcatggccaacgtgccctacctatttgccgacagcgacatcaacctctac
tggcacgacctgggccggaaaggcaacctgctcaccctcacctacgacaaccagtacctg
cacagcttctgctacaactccgaggtgataggtaccaacagcagcgactacatgattccc
gaccaattctcgcacaacctctcgatcagttacagcctgcacaacgggcgctacaacctc
gcgttcgaatgccgcaatttcaccgacgagaaactctacgacaatttcagcctccaaaaa
gcgggccgggccttctacgggaaaatccgggtccatttcggcgactga
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