Barnesiella viscericola: BARVI_05985
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Entry
BARVI_05985 CDS
T02986
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bvs
Barnesiella viscericola
Pathway
bvs03030
DNA replication
bvs03430
Mismatch repair
bvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BARVI_05985
03430 Mismatch repair
BARVI_05985
03440 Homologous recombination
BARVI_05985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvs03032
]
BARVI_05985
03400 DNA repair and recombination proteins [BR:
bvs03400
]
BARVI_05985
Enzymes [BR:
bvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BARVI_05985
DNA replication proteins [BR:
bvs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BARVI_05985
DNA repair and recombination proteins [BR:
bvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BARVI_05985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
DNA_pol3_delta
ResIII
AAA_14
AAA_24
AAA_5
DNA_pol3_delta_C
TIP49
AAA_16
Mg_chelatase
AAA_19
AAA_18
Rad17
AAA_assoc_2
QueC
AAA_2
GNAT_acetyltr_2
AAA_30
VapE-like_dom
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AHF12400
UniProt:
W0ENJ6
LinkDB
All DBs
Position
1456791..1458608
Genome browser
AA seq
605 aa
AA seq
DB search
MDNYIVSARKYRPSTFRSVVGQKALTQTLKNAIDSKKLAHAYLFCGPRGVGKTSCARIFA
KTINCFHPTESGEACNECESCRAFNEQRSYNIIELDAASNNSVDDIRTLIDQVRIPPQVG
QYKVFIIDEVHMLSAAAFNAFLKTLEEPPHHAIFILATTEKHKILPTILSRCQVYDFQRI
TTADIAEHLQYVASQEGITAEPEALDIIAQKADGGMRDALSIFDQVVSFTGGHITYKAVI
ENLNVLDYEYYFRLVDAFLQGNVPQALLIFKEVRDHGFEGQFFIGGLSRHLRDLLVSKDP
STLPLLEVSASVAQRYGEQAQKCSLAFLYRAMELSNRCDLDYRISNNKQFLVELTLIQIC
QIIHPVGSTPQEPPLQKINPPTPGNVPQPAPAAQPQPQNRPASQPQAQAPHQPQAQAQPA
PQTATAEPQATYRPATIRPTAPTHKPAAAAPAAQSRKAAPVRISIHQKPAEAAPAEQAAA
AQAVLDTPFTEEALNTAWLAYTQTIPTEVVLVNTMQSCRPKLLDPRTFVVSVDSQIQVNC
INEHFHELMSFLQNALKNNQFSMQLRINQPGEKEIIFSPKDVLKKMIEKNPDIKNLYDTF
DLEIA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggacaactatattgtttcggcacggaaataccgcccctcgactttccggtcggtggtc
ggacaaaaggcgcttacccaaacccttaaaaacgccatcgactcgaagaagctggcccac
gcctacctcttctgcggtccccggggggtgggcaaaacctcgtgtgcccgcatctttgcc
aagacaatcaactgtttccaccccaccgaatcgggcgaagcctgcaacgaatgcgagtcg
tgccgggccttcaacgagcagcgttcctacaacattatcgagctcgatgccgcctcgaac
aactcggtcgacgacattcgcaccctcatcgaccaggtgcgtatcccaccccaggtggga
caatacaaggtcttcatcatcgacgaggtgcacatgctctcggccgcagccttcaacgcc
ttcttgaagacactcgaagagccgccccaccacgccatcttcatcttggccaccaccgag
aagcacaagattctgcccaccattctctcacggtgccaggtctatgacttccagcgtatc
actacggccgacattgccgagcatctgcaatatgtcgcttcgcaagagggcatcaccgcc
gaacccgaagcgctcgacatcatcgcccaaaaggccgacgggggtatgcgcgacgccctc
tcgatattcgaccaggtggtgagtttcacgggcggacacatcacctacaaggccgtcatc
gaaaacctcaacgtactcgactacgaatactacttccgactggtcgatgccttcctgcaa
ggcaacgtaccgcaagcgctcctcattttcaaggaggtacgcgaccacggcttcgaggga
cagtttttcatcggcgggttgagccgtcacctgcgcgacctgctggtgagcaaagaccct
tcgaccctgccgctgctcgaagtgagtgcctcggtggcccaacgttatggcgaacaggct
caaaagtgctcgctcgccttcctctaccgggccatggagttgagcaaccgctgcgacctc
gactaccgcatcagcaacaacaagcagttcctggtggagctgaccctgatacaaatctgc
cagattattcacccggtcggctccacccctcaggaaccgcctctgcaaaaaataaatcca
cccacaccgggcaacgtgccgcaaccggcaccggccgcacaaccgcagccccagaaccgt
ccggcctcacaaccccaggcccaagccccacaccagcctcaggcacaggctcagccggcc
cctcaaaccgctacggccgaaccgcaggcgacctaccgtccggccacgatacgcccgacg
gctccgacacacaaaccggctgccgcggccccggctgcccaatcgagaaaagcggctccc
gtgcgcatctccattcaccagaaaccggccgaggctgctccggccgaacaggccgccgcg
gcacaagcggtactcgacaccccctttaccgaggaggcgctcaacacagcctggctggca
tacacccagaccattcccaccgaggtggtgctggtcaacaccatgcagagctgccgaccc
aaactgctcgacccccgcacctttgtcgtctcggtcgactcgcaaattcaggtcaactgc
atcaacgagcattttcacgaactgatgtctttcctgcaaaacgcgttgaaaaacaaccag
ttctccatgcagctgcgcattaaccagccgggtgaaaaagagattattttcagccccaaa
gacgtgttgaaaaagatgatcgagaagaaccccgacatcaaaaacctctacgataccttc
gacctcgaaatcgcctga
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