Barnesiella viscericola: BARVI_06235
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Entry
BARVI_06235 CDS
T02986
Name
(GenBank) ligand-gated channel protein
KO
K16092
vitamin B12 transporter
Organism
bvs
Barnesiella viscericola
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bvs02000
]
BARVI_06235
Transporters [BR:
bvs02000
]
Other transporters
Pores ion channels [TC:
1
]
BARVI_06235
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AHF12444
UniProt:
W0ETC8
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All DBs
Position
complement(1525807..1527822)
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AA seq
671 aa
AA seq
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MERLCRRVLLGMVTMVGAALWGQAGAVTPSTPDSIETQSLGEVMVTANRYSEVIPSQKLS
GKELQALNSFSVADAIRYFSGLQIKDYGGVGGLKTVNIRSMGTNHMGVYYNGIQLGNAQN
GQVDLGKFSLENIEEISLYNGQKSEIFQSAREFGSAGSIYLTTRRPKFKPGEKSHLKASF
KTGSFDLVNPSVLFEYKLSESVSMTFNSEWTGSSGKYKFRYKRVTPSGEVAYDTTATRQN
GDIDAVRFEGGLQGYLPNGFWKAYVYHYSSERGIPGAIVNNVWRNGERLWDRNTFVQGVY
QQDITRKYSIKVNAKYAFDYTHYMNNDDKLMRVDNHYKQREVYFSLANKYSILRNWDVSV
AYDLQWNGLSEYLSASRYTHWISAATAFSLADRLKMQASVLATLVDETTEGQAKAPNKSK
VTPALFLSYQPLKRYNWVLRAFYKQIYRMPTFNDLYYTDMGNAALKPESATQYNVGFTYA
VAPKTGFLSGFHTGVDAYYNLVNDKIIAYPKGQQFRWTMLNLGKVDIRGVDVQATATFRL
PFEIGLMTKVQYTYQQAIDITSPSDNYYRDQIPYIPWHSGSAILGLTYKDWGLNYSFVYV
GERYNQQENIEYNYVQPWYTSDISLVKSFKIKSVALKVTAEVNNLFDQAYDVVLNYPMPM
RNYRFGIAIEL
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaaagactttgtcgcagggtattgcttggaatggtcacgatggtgggggctgctctt
tgggggcaggccggggctgtcacaccctcaacgcccgactcgatagagacccagagcctg
ggcgaggtgatggttaccgccaaccggtacagcgaggtgattccctcccaaaagttatcg
ggcaaggagttgcaggcgctcaacagcttctcggtggccgatgccatacgctatttctcg
ggtctgcaaatcaaggactacggcggcgtgggcggtttgaaaaccgtcaatatccgcagc
atgggtaccaaccacatgggggtctactacaacggcattcagttgggcaacgcccagaac
ggacaggtagacctgggcaagttctcgctcgagaacatcgaggagatttcgctctataac
ggacagaagagcgagatattccagtcggcccgcgagttcggttcggccggttccatctac
ctcacgacccgtcggcccaagttcaagccgggcgagaagtcgcacttgaaggcctcgttc
aagaccgggtcgttcgacttggtcaacccctcggtgctgtttgaatacaaacttagcgag
agtgtgagcatgaccttcaacagcgagtggaccggctcgagcggcaaatacaagttccgc
tacaagcgggtcaccccctcgggcgaggtagcctacgacaccacggccacccggcagaac
ggcgacatcgatgccgtgcgcttcgagggcggcttgcagggctatctgcccaacggattc
tggaaagcctatgtctaccattacagctccgagcggggcattcccggtgccattgtcaac
aacgtgtggcgcaacggcgagcggttgtgggaccgcaacaccttcgtgcagggcgtctat
cagcaggatattacccgcaagtacagcatcaaggtcaacgccaagtatgcctttgactat
acccactacatgaacaacgacgacaagctgatgcgggtcgacaaccactacaagcagcgc
gaggtctatttctcgttggccaacaagtattcgatactccgcaactgggacgtgtcggta
gcctatgacttgcagtggaacggcctgtcggagtacctctcggccagccggtacacccac
tggatttcggctgccaccgccttctcgctggccgaccgcttgaagatgcaggccagcgtg
ctggccacgctggtcgacgagaccaccgaggggcaggccaaggcgcccaacaagagcaag
gtgacacccgccctcttcctctcgtatcagccgttgaaaagatacaactgggtgttgcgt
gccttctacaagcaaatctaccgcatgcctaccttcaacgacctctactataccgacatg
ggcaatgcggcactgaaacccgagagcgccacccagtacaacgtgggcttcacctatgcc
gtggctcccaagacgggattcctctcgggcttccacaccggggtcgacgcctactacaac
ctggtgaacgacaagattatcgcctatcccaaggggcagcagttccgctggaccatgctc
aacctcgggaaggtcgacatacggggcgtcgacgtgcaggccacggccaccttccgcctg
cccttcgagatagggctgatgaccaaggtgcagtatacctaccagcaggccatcgacatc
accagccccagcgacaactactaccgcgaccagataccctatatcccctggcacagcggc
tcggccatcttgggtctcacctacaaggattgggggctcaattacagctttgtctatgtg
ggcgagcgctacaaccagcaggagaatatcgaatataactatgtgcaaccgtggtacacg
agcgacatttcgttggtgaaatcgtttaagataaagtccgtcgcgttgaaggtgacggcc
gaggtcaacaacctgttcgaccaggcctacgacgtggtgctcaactacccgatgcccatg
cgcaactatcggttcggcatagcgattgaattgtga
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