Barnesiella viscericola: BARVI_07450
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Entry
BARVI_07450 CDS
T02986
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bvs
Barnesiella viscericola
Pathway
bvs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BARVI_07450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvs03021
]
BARVI_07450
Transcription machinery [BR:
bvs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BARVI_07450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
GerE
Sigma70_r4
Sigma70_ECF
Cep3
HTH_24
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AHF12625
UniProt:
W0EP92
LinkDB
All DBs
Position
complement(1797544..1798095)
Genome browser
AA seq
183 aa
AA seq
DB search
MDDVALTIQLKQGNQLAFTILYNTYSDQAYRLAFKYLCNKELAEDAVQNLFMKIWTKRDC
LDERRPLNHFLFTVLKNDILNILRDSKNNIFVLDDCLELLERIDDDQVDDEIDREQLDMI
RRAIDQLSPQRRKIFSLKISGQYSNQEIADKLHLSINTVKFQYSQALKQIKELIRQCAIS
LLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcgctttaacgatacagttaaaacagggcaaccagttggcttttaccatt
ctttacaacacctattcggaccaggcctatcggcttgcgttcaaatatttgtgtaataaa
gagttggccgaagatgccgtgcaaaatctttttatgaagatttggacgaagcgcgactgt
ctcgacgagcggcggccgttgaatcactttctgtttacggtgttgaaaaacgacatcttg
aatattctgcgcgattccaagaacaacatcttcgtgctggacgattgcttggagctgttg
gaacgaatcgacgacgatcaggtcgatgacgaaatcgaccgggagcagctggacatgatt
cgcagggctatcgaccagctgtcgccccagcgccggaaaatcttctcgttgaaaatttcg
gggcagtattccaatcaggagattgccgacaagttgcacctgtcgatcaataccgtcaag
ttccaatacagccaggccttgaagcaaattaaagagcttattcgacaatgtgctatctcg
ttgttattgtga
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