Barnesiella viscericola: BARVI_07780
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Entry
BARVI_07780 CDS
T02986
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bvs
Barnesiella viscericola
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvs03016
]
BARVI_07780
Enzymes [BR:
bvs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BARVI_07780
Transfer RNA biogenesis [BR:
bvs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BARVI_07780
Prokaryotic type
BARVI_07780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHF12678
UniProt:
W0ET37
LinkDB
All DBs
Position
1871928..1872668
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AA seq
246 aa
AA seq
DB search
MDFNEGEIIYIDKPLHWTSFDVVKRIRLRILRRLKQKKLKVGHAGTLDPLATGVMIVCTG
RATKRIEEFQYHTKEYIATLRLGATTPSFDLETEVDATYPHEHITREIIERTLPRFVGSI
MQIPPSYSACKIDGRRAYDMARKGQEVELKPKELVIDEIELLDCELPEIRIRVVCSKGTY
IRALARDIGIALGSGAHLVGLVRTRVGDVTLADCLSVDEVARLIDEAPIEATEPEDKKEK
EENKPI
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggattttaacgaaggcgaaatcatatatatcgacaaaccgctgcattggacctcgttc
gatgtggtaaagcgaatccggttgcggatactgcgtcggctcaaacagaaaaagttgaag
gtgggccacgccggtaccctcgacccgctggccaccggagtgatgattgtctgcaccggg
cgggcgacgaaacgcatcgaggagttccagtaccacaccaaagagtatatcgctaccctg
cggttgggggccaccactccctccttcgatttggagaccgaggtcgatgccacctatccc
cacgagcatattactcgggagattatcgagcgaactttaccgcgttttgtcggttccatt
atgcagatacccccttcctattcggcctgcaagatagacggtcgtcgggcttacgacatg
gcccgcaaggggcaggaggtggaattgaaacccaaggagctggtcatcgacgagatcgag
ttgctcgattgcgaattgcccgagatcagaatccgggtggtgtgcagcaagggtacctac
atcagagccttggcccgggacatcgggattgcccttggcagtggagcccacttggtgggg
cttgtgcgtacacgagtaggcgatgtgacgctggccgattgcctgtcggtcgacgaggtg
gcccggctcatcgacgaagcgcccatagaggcgaccgagccagaagataaaaaagaaaaa
gaagaaaataaaccgatatga
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