Barnesiella viscericola: BARVI_07960
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Entry
BARVI_07960 CDS
T02986
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
bvs
Barnesiella viscericola
Pathway
bvs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BARVI_07960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvs03400
]
BARVI_07960
DNA repair and recombination proteins [BR:
bvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BARVI_07960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
nSTAND_NTPase5
ATPase_2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AHF12703
UniProt:
W0ET59
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Position
1909974..1912589
Genome browser
AA seq
871 aa
AA seq
DB search
MAKEIVETPLMKQYIEMKAQHPDAILLFRVGDFYETFSDDAIVASEILGITLTRRANGAA
QYVELAGFPHHALDTYLPKLVRAGKRVAICEQLEDPKLAKKLVKRGITELVTPGVSINDN
ILDHKENNFLGGVHFGKNNKVGVAFLDISTGEFLAAEGDYDYVDKLLGNFAPKEVLFERT
KRKLFEEHFGNRFFTFELDDWVYTEDAARDRLLRHFETKNLKGFGVHNMPCAIIAAGSLL
HYLDITQHTHIAHITSLARIEEERYVRLDKFTVRSLELLAPMNEGGKSLLDVIDRTVTPM
GARMLRRWIIFPLKDVKPIEDRLNGVEFFFRHPEAREVIDPQLDTIGDMERLISKVAVGR
ISPREVVQLKVALQAIEPIKAVCEQSDEPVLQRIGEQLNCCASIRDRIEREIVPDAPNLA
NRGGIIRKGVNAELDDLREISSSGKDYLLHVQQRESDRTGIPSLKVGYNNVFGYYIEVRN
THKDKVPADWVRKQTLVSAERYITQELKEYEEKILGAEEKILSLETQLFNDLILALTEYI
PAIQLDSTLIARLDCLLSFVKSAVENRYIRPEINDSLTIDIKEGRHPVIEKQMPPGESYI
SNSVELDNDRQQIMMITGPNMAGKSALLRQTALIVLMAQIGSFVPAEAASIGIVDKIFTR
VGASDNISLGESTFMVEMTEAADILNNLSERSLVLFDELGRGTSTYDGISIAWAIVEHIH
EHPKARAKTLFATHYHELNEMERTYKRIVNYNVSVKEIDNKVIFLRKLVRGGSEHSFGIH
VAKLAGMPQSIVKRATQILKQLESENRQTGMAKPTAEIASSRGGVQLSFFQLDDPVLSQV
RDEILRADINNLTPVEALNKLNEIKKIITGK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaggaaattgttgaaaccccgctgatgaaacagtacatcgagatgaaggcccag
caccccgatgccatactgcttttcagagtgggcgatttctatgaaactttttcggacgat
gccatcgtcgcatctgaaattctgggtattacgcttacccgccgggcaaacggcgccgca
caatatgtcgagttggccggtttcccgcaccatgcgctcgacacctatctgcccaaactg
gtacgggccggcaagcgggtggctatctgcgaacagctggaagaccccaagctggccaag
aagctggtgaagcggggcattaccgagctggtgactcccggggtgtcgatcaatgacaat
atactggaccataaggagaacaactttctgggcggtgtccactttgggaaaaacaacaag
gtgggcgtggcctttctcgatatctcgaccggcgagtttctggcggccgagggcgactat
gactatgtagacaagctgctgggcaacttcgcccccaaggaggtactcttcgagcggacc
aaacggaagctcttcgaggagcatttcggcaatcgctttttcaccttcgagctcgacgac
tgggtctataccgaggacgctgcccgcgaccggctgttgcgccatttcgagaccaagaac
ctcaaaggattcggggtgcacaacatgccctgtgccatcattgcggccgggtcgctgctg
cactacctcgacatcacgcagcacacgcacatcgcccacatcacctcgctggcccgtatc
gaagaggagcggtatgtgcggctcgacaagttcacggtgcgcagtctcgaactgctcgcc
cccatgaacgaggggggcaagagcctgctcgatgtcatcgaccgcaccgtcacccccatg
ggagcccgtatgctcaggcggtggattatcttcccgctgaaagatgtgaaacccatcgag
gaccggctcaacggggtggagttctttttccgtcaccccgaggcccgtgaggtcatcgac
ccgcagctcgacacgataggcgacatggagcggctcatctcgaaggtggccgtgggccgc
atctcgccccgcgaggtggtgcagctcaaagtggccttgcaggcgatagagcccatcaag
gcggtgtgtgagcagagcgacgagccggtgctgcaacgcatcggcgagcaactgaactgc
tgtgcgagcatacgcgaccgcatcgagcgcgagattgtccccgacgcccccaacctggcc
aaccggggcggcattatccgcaagggggtgaatgccgagctcgacgacctgcgtgagatt
tccagctcgggcaaggactacctgctgcatgtgcagcagcgcgagagcgaccgcacgggt
attcccagcctgaaagtgggttacaacaacgtcttcggctattacatcgaggtgcgcaat
acccacaaggataaggtgccggccgattgggtgagaaaacagaccctggtgagtgccgag
cgctacatcacccaggagttgaaggagtatgaagagaagatcctcggggccgaggagaag
atactctccctcgaaacgcaactcttcaacgacctgattctggccctcactgaatatatc
ccggccatacagctcgactccaccctgattgcccggctcgactgcctgttgtcgtttgtc
aagtcggccgtcgagaaccgttatatccgtcccgaaatcaacgactcgctcaccatcgac
atcaaggaggggcgccaccccgtcatcgagaagcagatgcccccgggcgagagctacatc
agcaacagtgtggagctcgacaacgaccggcagcagatcatgatgattaccgggcccaac
atggccggtaagtcggccctgctgcggcagacggcactcatcgtgctgatggcgcagata
ggcagtttcgtccccgccgaggcggccagcataggcattgtcgacaagatattcacccgg
gtgggagcctcggacaacatctcgctgggcgagtcgaccttcatggtcgagatgaccgag
gcggccgatatcctcaacaacctgtcggagcgcagcctcgtgctgtttgacgagttgggc
cgcggtaccagtacctacgacggtatctccattgcctgggccattgtcgagcacatacac
gagcaccccaaggcccgggccaagacgctgtttgccacccactatcacgaactcaacgag
atggagcgcacctacaagcgcatcgtcaactacaacgtgtcggtcaaggagattgacaac
aaggtgatattcctgcgcaagctggtgcggggcggcagcgaacacagcttcggtatccat
gtggccaagctcgccggtatgccccagagcatcgtgaagcgggctacgcaaatcttgaaa
cagctcgaatcggagaaccggcagacgggcatggccaaacctacggccgagattgcctcg
tcgcgcggtggcgtgcagctgagcttcttccagctcgacgaccccgtgctctcgcaggtg
cgcgacgagattctgcgggccgacatcaataacctcacgccggtcgaggcgctgaacaaa
ctgaacgaaataaaaaagataatcaccgggaaataa
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