Barnesiella viscericola: BARVI_10600
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Entry
BARVI_10600 CDS
T02986
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bvs
Barnesiella viscericola
Pathway
bvs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BARVI_10600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvs03021
]
BARVI_10600
Transcription machinery [BR:
bvs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BARVI_10600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_11
HTH_24
HTH_30
UPF0122
HTH_23
HU-CCDC81_bac_2
HTH_AsnC-type
GerE
PCI
HTH_28
HTH_Tnp_4
HTH_Mga
HU-CCDC81_euk_2
DUF134
HTH_40
DUF8785
Motif
Other DBs
NCBI-ProteinID:
AHF13122
UniProt:
W0EQT7
LinkDB
All DBs
Position
complement(2485492..2486079)
Genome browser
AA seq
195 aa
AA seq
DB search
MENEKFENEMLLVAALKIDSHEAFVKIFRHYYSDLVIFASRFIPDKETREDIVQEAFVKI
WTNRKVLEIRTSLRTYLISLVQHLALDEIKHRKVKTLYQDMNHEIIMSLPADEHVMYSEL
SDAIDNLLSQLQPDVLETYRLSRTHNLKYTEIAEKLNISVRTVESRVSKTVKFLQQNLKD
YKIIIYWILTFQHLL
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaaaaatttgaaaacgaaatgcttttagtggctgccttgaagatagacagc
catgaagcgtttgttaaaatttttcgacattattattcagaccttgtaatcttcgcatcc
cgtttcatcccggataaggagacacgcgaagatatagtccaggaagcatttgtgaaaatc
tggacgaaccgaaaagttcttgaaattcggacatcactgaggacatatcttatatcctta
gtacagcatcttgctttagacgaaatcaagcaccgcaaggtcaagaccctatatcaggat
atgaaccatgagattatcatgtccctgccggccgatgaacatgtcatgtattcggaatta
agtgacgctattgataatctgctctcacagctccagccggatgttcttgaaacatatagg
ttgtcaagaacacataatctgaaatataccgaaatcgccgagaaactcaatatctcggtc
aggactgtggaatctcgcgtcagcaaaacggtaaaatttcttcaacagaatctcaaagat
tataagatcatcatatattggattctaacgtttcaacaccttttataa
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