KEGG   Barnesiella viscericola: BARVI_12660
Entry
BARVI_12660       CDS       T02986                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
bvs  Barnesiella viscericola
Pathway
bvs02024  Quorum sensing
bvs03060  Protein export
bvs03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bvs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BARVI_12660
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BARVI_12660
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BARVI_12660
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bvs02044]
    BARVI_12660
Enzymes [BR:bvs01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BARVI_12660
Secretion system [BR:bvs02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BARVI_12660
  Eukaryotic Sec-SRP protein
   BARVI_12660
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 cobW SRPRB KTI12 AAA_33 DO-GTPase1 APS_kinase nSTAND3 AAA_17 KAP_NTPase AAA_18 TPP_enzyme_M ATPase ResIII NTPase_1 AAA_24 ParA TsaE MMR_HSR1 CLP1_P 6PF2K NACHT AAA_30 AAA_19 AAA_14 AAA_16 AAA_31 SLFN-g3_helicase ATP_bind_1 Thymidylate_kin ArsA_ATPase ATPase_2
Other DBs
NCBI-ProteinID: AHF13438
UniProt: W0EV54
LinkDB
Position
complement(2953290..2954612)
AA seq 440 aa
MFENLSERLERSFKILKGEGKITEINVAETLKDVRRALLDADVNYKVAKQFTDTVKAKAL
GQNVLTAVKPGQLMVKIVHDELAALMGGETADLNLSQNPSIILMSGLQGSGKTTFSAKLA
KMLKSKKAKRPLLVACDVYRPAAIEQLKVLGEQIEVPVYTEPDSKDAVSIAANAVKYAKD
NHLDLVIVDTAGRLAIDEQMMNEIEAIKKKINPTEILFVVDAMTGQDAVNTAKEFNDRLD
FNGVVLTKLDGDTRGGAALSIRTVVDKPIKFIGTGEKLEAIDYFHPARMADRILGMGDIV
SLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIQQIKKMGNLKDLASMIPGVGKAIK
DLDIDDNAFKSIEAIIYSMTPKERSNPELLNGSRRQRIAAGSGTSIQEVNRLVKQFDQTR
KMMRMVTQNKGAMMKGFRRK
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgtttgaaaaccttagtgaaagacttgaacggtcttttaaaatattgaagggtgaaggc
aaaatcaccgaaatcaacgtggccgagacgctcaaagatgtgcgccgtgccctgctcgat
gccgacgtcaactacaaagtagccaagcaatttaccgataccgtaaaggccaaggcgctg
ggacaaaacgtgctcaccgccgtgaagccgggacagttgatggtcaaaatcgtgcacgac
gaactggctgccctgatgggtggcgaaacggccgacctcaacctgtcgcaaaacccatcg
attatcctcatgtcgggtctgcaaggttcgggtaagacaaccttctcggccaagttggcc
aagatgttgaaatcgaagaaggccaaacgccccttgctcgtggcctgcgacgtgtaccgt
cctgccgctatcgagcagttgaaggtgctgggcgagcaaatcgaggttcccgtttacacc
gagcccgacagcaaggacgccgtgagcatcgccgccaacgccgtgaaatatgccaaggac
aaccacctcgacctggtcattgtcgataccgccggccgcttggccatcgacgagcagatg
atgaacgaaatcgaggccatcaagaagaaaatcaaccccaccgaaatcctgttcgtggtc
gacgccatgaccggtcaggacgcggtcaacacggccaaggagttcaacgaccggctcgat
ttcaacggtgtggttctgaccaagctcgacggtgatacccgtggtggtgccgccctctct
atccgcacggtggtcgacaagcccatcaagtttatcggtaccggcgagaagctcgaagcc
atcgactacttccaccccgcccgtatggccgaccgtatcctgggtatgggcgatatcgtt
tcgctggttgagcgggcccaagagcaatacgacgaggaggaggccaaacggctgcaaaag
aagattgccaagaaccagttcgacttcaacgacttcctcagccagattcagcaaatcaag
aagatgggtaacctcaaagacctggcctcgatgatcccgggtgtgggcaaagccatcaag
gaccttgacattgacgacaacgccttcaagagcatcgaagccatcatctactcgatgact
cccaaggagcgcagcaatcccgagttgctcaacggcagccgccgccaacgcatcgccgcc
ggtagcggcacctcgatacaggaggtcaaccgactggtcaagcagtttgaccaaacgcgc
aagatgatgcgcatggttacccaaaacaagggcgccatgatgaagggattcagacgaaaa
taa

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