Borreliella valaisiana: P613_01165
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Entry
P613_01165 CDS
T03221
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bvt
Borreliella valaisiana
Pathway
bvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P613_01165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvt03021
]
P613_01165
03019 Messenger RNA biogenesis [BR:
bvt03019
]
P613_01165
Transcription machinery [BR:
bvt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P613_01165
Messenger RNA biogenesis [BR:
bvt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P613_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA
Spore_III_AA
DUF5091
AAA_22
NB-ARC
DUF1269
AAA_18
AAA_25
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AIJ29599
LinkDB
All DBs
Position
complement(234532..236079)
Genome browser
AA seq
515 aa
AA seq
DB search
MDKKNGGFDLESEVRRLDVSKEFKIEDNLKKKVVKVVAKKDSASNVTKSSDLSSAKDSNG
VVFSEFDYDIPASGLENNIKTLEQSNIIKFFNGKDYLEVEKLYDKPITEVRKIVEGLGTN
HTIAVTMKKTELIFLLVKILSENNINVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVS
PSQIRLFNLRTGDILYGQIRSPRDGERFFAMVKIKSINNQDPTFAQNRIPFDNLTPLYPN
IKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLD
SITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGS
KMDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRR
ILGGVDDYEGVEVLIEKMKKSKNNEIFLKTMSNGN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaaaatggtggatttgatttagaaagtgaagtaaggcggttggatgtttct
aaagagtttaagattgaagataatttgaaaaaaaaagtggttaaagttgttgccaaaaag
gattctgcatctaacgtgacaaaatcttcagatttaagtagtgcaaaggattcaaatggt
gtagtattttctgaatttgattatgatattcctgcttcgggtttagaaaataacattaaa
actttagagcaaagcaatatcattaagttttttaatggaaaagattatttagaggttgaa
aaactttatgacaagccaattacagaggttagaaaaattgttgaaggtcttggaaccaat
catactattgctgtaacaatgaaaaaaaccgaattaatatttttattggtgaaaatatta
agtgaaaataatattaatgttttatttacaggtgtgcttgatgtacttagtgatggctat
ggatttttgagaactgcatcaaattcttatctttcaggaggtaatgatgtttatgtttct
ccttctcagattagactttttaatttaaggacaggtgatattttatatggtcaaattaga
tcgcctagggatggtgaaagattttttgccatggttaaaattaaatctattaataatcaa
gatcctacgtttgctcaaaacagaataccttttgataatttaacccctctttatcctaat
attaaattgaatcttgaatatgaaaattgcaatatttctacaaggcttattaatcttttt
tcacctataggtaagggacaaagggctttaatagtgtcccctccaaaagcgggaaagacc
actttgcttcaaaaaatagctaacgcaataactaccaattattcggatgttattttgatg
atattgcttattgatgagagaccagaagaagttacagatatgattcgtagtgttaaaggc
gaagtgattgcatctaattttgatgagcaggctagtaggcacgtgcaggtagcagagatg
gttattgaaaaggcaaaaaggcttgttgaaaacaaaaaagatgttgttattttgcttgat
tctattacaaggcttgcaagggcatataatcaaactatgccaacttctggtaaaatttta
tcaggcggagtagattctaatgctcttcataagccaaagaggttttttggatctgctaga
aatattgaagaagggggaagtttgactattatagctactgctttggttgatactggtagt
aaaatggatgaagttatttttgaagaatttaaaagtaccggtaatatggaattaattctt
gatagaagtttggcagacagaagacttttccctgctattaatattaaaaagtcaggcacc
agaaaagaagagttacttcttagtgaagaggagcgctctaagattttgcttattagaaga
atattaggaggtgttgatgattatgagggagttgaagttctgatagaaaagatgaaaaaa
agcaaaaataatgagatttttttaaagacaatgagtaatggtaattaa
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