Borreliella valaisiana: P613_01950
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Entry
P613_01950 CDS
T03221
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bvt
Borreliella valaisiana
Pathway
bvt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bvt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P613_01950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvt03021
]
P613_01950
03400 DNA repair and recombination proteins [BR:
bvt03400
]
P613_01950
Enzymes [BR:
bvt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P613_01950
Transcription machinery [BR:
bvt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P613_01950
DNA repair and recombination proteins [BR:
bvt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P613_01950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Biotin_lipoyl_2
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AIJ29752
LinkDB
All DBs
Position
complement(400642..404109)
Genome browser
AA seq
1155 aa
AA seq
DB search
MIKRVHLGQGRAEEILDLPNLIEIQLNSYEKFLQLDKLKNKKPLLNEGLESVFRNIFPIK
SGNGDVALEYERYYIENDALDFTEKECKRKGQSYEAVLKVRLNLQFLATGEIRQKDVYMG
TIPLMTERGTFIINGAERVVVSQIHRSPGVVFYKEKDLYSARIIPYRGSWLEFEIDSKKD
YLYVKIDRKKRILITFFLRALGFDTREKIIETFYNIKKIKVEDDTKRDLPGKYLAKSINI
RENMYYRAGDKITLQDVEDFLQNGVNEIELVDFDGYNDVFGKYFVSSNVILNCLEKEDAF
FALKDGSKELPKESVMLAVYGALFPGEPISIDNAENDFKTIFFSERRYDLGRVGRYKLSK
KFGFDDLSTSVLTMNDIVNTISHLLRIYEGHDILDDIDHLGNRRVRSVGELLTNIYKGAM
SRVEKIAKDRMSNKEVFNLKPQELISVKPIVSAVKEFFATSQLSQFMDQVNPLAELTHKR
RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYSRVNDYGFLE
TPYRKVVNGEVTDELEYLSAIDEEKKCIAQANAAFDSNGKYLEDLVSVRISGDYTTTNPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPKPPIVGTGMESVV
AKDSGVVIKAKRSGEVILATSNKIVIKPFESENAKDLDEYQIVKYERTNQDTCFNQSVLV
KEGQKVERGEIIADGPATRYGELALGNNLLLGVIPWNGFNYEDAILISDRIVKEDLYTSI
HIKEFSIEVRETKLGPEKVTGDIPNVSEKILNKLDENGIIRIGTYVKPGDILVGKVTPKS
EGDITPEFRLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVGNLSPGVEEILK
VYVAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPLGVPSRMNIGQ
LMESQLGLAGKYLNESYNVPVFESATNEQIQEKLKKAGFNPTSKEILYDGYTGEPFENEV
MVGVIYMLKLHHLVDDKMHARSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAH
TLQELLTVKSDDMSGRVKIYENIVKGIPTNVSGIPESFNVLMQELRGLGLDLSIYDDNGN
QVPLTEKEEELINKS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagagttcatctgggacaaggaagagctgaggagattttagacttacctaac
ctgatagaaatacaattaaattcttatgaaaaatttttacagcttgataaattaaaaaat
aaaaaacctttacttaatgaaggcctcgagtctgtttttagaaatatatttcccatcaag
agtggaaatggtgatgttgctcttgagtatgaaagatactatatagaaaacgatgccctt
gattttacagaaaaagaatgtaaaagaaagggtcaaagttatgaagctgttttaaaagta
agactaaatttgcaatttttggctactggggaaataagacaaaaagatgtatacatggga
actattcctttaatgacagaaaggggtacttttattattaatggggctgagagagttgtt
gtttctcagattcataggtctccaggggttgttttttataaagaaaaggatttatattct
gctagaataatcccttatcgtggttcttggttagaatttgagattgattctaaaaaagat
tatctttatgtaaagatagatagaaaaaaaagaatactcataaccttttttttaagagct
ttagggtttgatacgagagaaaaaataatagaaactttctataatattaaaaaaattaaa
gttgaagatgacacaaaaagagatcttccaggtaaatatttagccaagagtattaacata
agagagaatatgtattatagagcaggagataagattactctacaagatgttgaagatttt
ttacaaaatggagtaaatgaaatagagcttgttgattttgatggctataatgatgttttt
ggaaagtattttgtgagctcaaatgttattttaaattgtcttgagaaagaggatgctttt
tttgctttaaaggatggttctaaagagcttccaaaagaatcggttatgcttgctgtttat
ggtgcactttttcctggtgagccaatatctattgataatgctgaaaacgattttaaaact
atattcttttctgaaagaagatatgatcttgggcgtgtgggacgatataaactttctaaa
aaatttggatttgacgatttgagtacatcggttttaactatgaatgatattgttaacacc
atatctcatcttttgagaatatatgaagggcatgatattcttgatgatattgaccatcta
ggaaataggagagtacgttctgttggagagcttcttaccaatatatataaaggggcgatg
tcaagagttgaaaaaattgctaaagatagaatgtctaacaaggaagtttttaatctaaag
ccccaggaattaataagcgttaaacctattgtatctgctgttaaggaattttttgcaacc
agccagctttcgcagttcatggatcaggtcaatcctttggccgaacttactcataaaagg
cgtcttaatgctcttggaccagggggactttcaagagatagagcaggatttgaagtaaga
gacgtccattatactcattatggaagaatgtgtcctattgaaactcccgaagggccaaat
attggacttattgtttctttagccacttattctagagttaatgattatggttttttagaa
accccttatagaaaggttgttaatggagaggtaactgacgaattagaatatttatctgct
attgacgaagaaaaaaagtgtattgcccaggctaatgctgcttttgattctaatggaaaa
tatcttgaagatctggtttctgttagaatttctggtgattataccacaacaaatcctaaa
aatatagactatatggatgtctctcctaggcagttaatttcagtatcttcagcgttaatt
ccttttcttgagcacaatgatgcaaatagggcgcttatgggttctaatatgcaaagacaa
gcagtacctctgctttttcccaaacctccgattgttggcacgggtatggaaagtgttgtt
gcaaaggattcgggagtggtaattaaggctaaaagaagtggggaagttattcttgcaaca
agcaataaaatagttattaaaccttttgaatcagagaatgctaaagatttagatgaatat
cagattgttaagtatgaaagaacaaatcaagatacttgctttaaccaatctgttttggtt
aaagagggtcaaaaggttgaaaggggtgagataatagctgacggtcctgctactagatat
ggggagcttgctcttggtaataatttattgctaggagttattccttggaatggatttaat
tatgaggatgctatattaatttctgacagaattgtaaaggaagatctttatacatctatt
catattaaagaattcagcatagaagtaagagaaactaaacttggtcctgagaaagtcaca
ggagatataccgaatgttagcgaaaagatactaaacaaattagatgaaaatggaattata
cggataggaacttatgtaaaacctggcgatattctggtcggtaaagttaccccaaagtcg
gaaggagacattactcccgaatttagacttttaacttctatttttggagaaaaagcaaaa
gatgttaaaaataattcattaaaagttcctcatggtaccgaaggtacagttattgatgtt
caaagaattactaaagaggatgttggcaatctttctcctggagttgaagagatacttaaa
gtttatgttgctaaaaaaaggaagcttaaagagggtgataaaatggctggtcgacacggt
aataagggtgttgttgcaaaaatccttcctgttgaagatatgccttaccttgcagatgga
actcctcttgatatatgtttaaatcctttaggagtgccgtctagaatgaatattgggcag
ttaatggaatcgcaattaggtcttgctggtaaatatcttaatgaatcttataatgttcct
gtttttgaatctgctacaaatgaacaaattcaagaaaaattaaagaaagctggatttaat
ccaacttctaaagaaattttatatgatggttacacaggagaacctttcgaaaatgaagta
atggttggggtgatttatatgcttaaactgcaccaccttgttgatgataaaatgcatgca
agatcaacagggccatattctcttgtttctcaacaacctcttggaggaaaagctcaattt
ggtgggcaaagacttggggaaatggaggtttgggctcttgaagcttatggtgcggctcac
actcttcaagaacttttaacagttaaatctgatgatatgtcaggcagagtcaaaatatat
gaaaatatagtaaaaggcattcctactaatgtatcagggattcccgagtcttttaatgtg
ctaatgcaagagcttagaggacttggacttgatttatcaatttatgatgataatgggaat
caggttcctttgacagaaaaagaagaagaattgattaataaaagctag
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