Borreliella valaisiana: P613_03640
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Entry
P613_03640 CDS
T03221
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bvt
Borreliella valaisiana
Pathway
bvt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bvt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P613_03640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvt03021
]
P613_03640
Transcription machinery [BR:
bvt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P613_03640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AIJ30057
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Position
748089..749984
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AA seq
631 aa
AA seq
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MLDLEKKYSKLIEGIVTHLGDRKSLSFSELSNLLPGDILEPEILDCICSILEDRGIRLVN
KISELDLVGTEEGNDEDEEVEIESDRNFMILDDGFQSDEEDIDIDGKLDDCDEEDISVKD
DLGSGYIKSNVLKDSHSEDPIKLYLKEIGKEFLLTGNQEVELAKQMDSGEGIIENILKNE
GLVIENYYNLVNTIYSRMEREEFFKREKDRDKENNPDYYNKKKRIASFYKIPLKPIQDRL
ISYVDNKHRVYELGGDILEKNLKRERSALKELLRDIPLYQDELRIFSDDYIDSANKIKDL
QRQQRIILSRLKIEKIRDLRVLGRDLTIAEKRIEIEKSLKLKEDAIKEQITEAQLAQKEL
ERIEMYYEYPMDKIISMSEEIAKGKQMMQHAKDQLIKANLRLVVSIAKKYANRGLHFFDL
VQEGNIGLIKAVEKFEYKRGFKFSTYATWWIRQAITRSISDQARTIRVPVHMIEQINRLN
RETRYLIQVLGKDPTDEELSDRLGWELKKVKTVKSVSREPVSLETPIGEEEDSVLSDFIE
DKAIKNPANHTSFVVLQDQIRAILGTLPEREQEVVKMRFGLEDGYSLTLEEVGLHFNVTR
ERIRQIESKALRRLKNPKKTQKLKDYLEDLN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
ttgctggatttggaaaagaaatattcgaagctgatagagggtattgttacacatttggga
gatagaaaatctcttagttttagtgaattatcaaatttgttgcccggtgatatattggaa
ccggagatccttgattgtatttgttcaatacttgaggataggggaataaggttagttaat
aaaatttcggaactagatctggtaggcactgaagagggaaatgatgaagatgaagaggtg
gagattgaatccgatagaaattttatgattttagatgatggtttccaaagtgatgaggaa
gatattgatattgatggcaaactggatgattgtgatgaagaagatatttctgttaaggat
gatttgggttctgggtatattaaaagtaatgtcttaaaagatagtcattcagaagatcca
ataaagctttatttaaaggaaataggaaaagagttcttattaacaggaaatcaagaagtt
gaacttgccaagcaaatggattctggagagggcataattgagaatattcttaaaaatgag
ggacttgttatagaaaactattataatcttgttaatactatttattcaagaatggagagg
gaagagtttttcaaaagagaaaaagatagagataaagagaataaccctgattattataat
aaaaaaaaaagaattgcctctttttataaaattcctttaaaaccaattcaagatcgttta
ataagttatgtagataataagcatagggtatatgagcttgggggggatattcttgaaaag
aatttaaaaagggaaagatcagccttaaaagagcttttacgagatattcctttgtatcaa
gatgaactaagaattttttcagatgattatattgactcggctaacaaaataaaggatttg
caaaggcagcaaagaataattttaagcaggttaaaaattgaaaaaataagagacttaaga
gtgcttggaagagatttgactattgctgagaaaagaatagagatagaaaaatctcttaaa
cttaaagaagatgctattaaagagcagattacagaggctcagcttgctcaaaaagaactt
gagagaattgaaatgtattatgaatacccaatggataagataataagcatgtcagaggag
attgctaaagggaaacaaatgatgcaacatgctaaagatcagttgattaaggctaattta
aggcttgttgtaagcattgctaagaaatatgcaaatagaggtcttcatttttttgacctt
gttcaagaaggtaatattggattaattaaagctgttgaaaaatttgaatataaaagaggt
tttaagttttcaacttatgctacttggtggattagacaggctataacaagatctatttct
gatcaagctcgcacaattagagttcctgtgcatatgattgaacaaatcaataggcttaat
agagaaactaggtatctaattcaagttttggggaaagaccccacggatgaagagctttca
gacagacttggatgggagcttaaaaaggttaaaactgtaaaaagtgtttcaagagaacct
gtttctcttgaaacaccaattggagaagaagaagattctgttcttagcgattttattgag
gataaggcaataaaaaatcctgcaaatcatacgtcttttgtagttttgcaagatcaaata
agggcaattcttgggactcttcctgaaagagagcaagaagttgtcaaaatgagatttggg
cttgaagatggctattctttaactcttgaagaggttggacttcattttaatgttacaaga
gaaagaattagacaaattgaatctaaggcattaaggcggcttaaaaatcctaaaaaaact
caaaaattaaaagattatcttgaagatttaaattaa
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