Borreliella valaisiana: P613_04130
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Entry
P613_04130 CDS
T03221
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bvt
Borreliella valaisiana
Pathway
bvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P613_04130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvt03019
]
P613_04130
03016 Transfer RNA biogenesis [BR:
bvt03016
]
P613_04130
Enzymes [BR:
bvt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
P613_04130
Messenger RNA biogenesis [BR:
bvt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P613_04130
Transfer RNA biogenesis [BR:
bvt03016
]
Prokaryotic type
tRNA degradation factors
P613_04130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_PNO1_2nd
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AIJ30148
LinkDB
All DBs
Position
848675..850843
Genome browser
AA seq
722 aa
AA seq
DB search
MRKILKLKVGRDELVFETGLMAKQANGSVLATYGGSSVLATVCCSSNVREDLDFVPLSVE
YNEKYYAAGKIPGGFIKREGKPKDKEILVSRLIDRPMRPLFDKRFGREIQVIPTTLATDQ
LNPPDIVGMNAAFTAVFLSDIPFSGPIAAVRMVYLNGEFIVNPSFEEIHDSDLDIVVAGS
LNGITMVEGGANEVSEDILLSAIDGAHEYIKQICNAQKEFLEIVGKKEKLPLAFEEKIFE
FKEELRDFVYSDLKEACFVKGKLNRDKAITLLRNKSYEHFSSLEKLTDSNEPLFNRAFDD
FEKEIVRNSILNDKIRTDGRTPNEIRDIIAEVDILSRTHGSALFTRGETQALAVTTLGTS
IDEQIMDDIDGDKRLNFMLHYNFPPFSVGETGRLMTGRREIGHGHLAQRALESMVPGKND
FPYTIRVVSEILESNGSSSMATVCAGSMSLMSAGVPVKRQVAGIAMGLISEGDKYVVLSD
ILGEEDHLGDMDFKVAGTKNGITGFQMDIKIENVTKNLMRDALEQARVGRIHILSIMDAV
ISDSRVGISKYAPKIVQLQIDIDKISLVIGSTGKTVKAITDEFEVKVQIEQNGKIILFGD
DDFKMQKAKEKIESIVREPKIGEVYEGIVKKINSFGAFIELTPTKEGFLSTRLKSRDNKY
GSGRFGNSNRYSRFGGGGDNIRGNAGLVRLPKLEEGQRVKVRIIDIDKFGKIDLEIVRDK
DY
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
ttgaggaaaatattaaagttgaaagtaggcagagacgagttagtatttgagactggactt
atggctaagcaggctaatggttcggttcttgcaacttatggaggatcttctgttcttgcg
actgtttgttgttcaagcaatgtgagagaagatttagattttgtccctctttctgttgaa
tataatgaaaaatattatgcagctggcaagattccaggaggatttataaaaagagaggga
aagccaaaggataaagaaatacttgtttctagattaatagatagaccaatgagacctctt
tttgataaaagatttggtcgagaaattcaagtaattcctacgactttagctacagatcag
ctcaatccccctgatattgttggaatgaatgctgcttttacggcagtttttttatcagat
attccgtttagtggtccaattgcagctgttagaatggtttatttgaatggtgaatttata
gtaaatccttcttttgaagagattcatgattctgatcttgatattgttgttgcgggaagt
ttaaatggaattacaatggtagaaggcggtgctaatgaggttagtgaggatatattgcta
tcagcaatagatggtgcacatgaatatattaaacaaatttgcaatgctcaaaaagaattt
ttagagattgtaggcaaaaaggaaaaacttcctttagcttttgaagaaaaaatatttgaa
tttaaagaagagcttagagattttgtttattctgatcttaaagaagcttgttttgttaag
ggaaagcttaacagagataaagctataactttgctgcgaaataagtcttatgagcatttt
tcttctcttgaaaagttgactgatagtaatgaacccctttttaatagagcttttgatgat
tttgagaaggagattgttagaaattctattcttaacgataagattagaacagatggtaga
actcctaatgaaataagagatattattgcagaagttgatattttaagtagaacgcatgga
tctgcgctttttacaagaggggagacgcaagctttagcagtaactactcttggtacaagc
attgatgagcaaataatggatgatattgatggcgataagcgtcttaattttatgcttcat
tacaattttcctccattttcagttggtgaaactggcagacttatgactggtaggcgagag
attggtcatggtcatttagctcaaagagctttagaatcaatggttcctgggaaaaacgat
tttccttataccattagagtagtttctgagattttggagtctaacggatcttcatcaatg
gctactgtttgtgctgggagcatgtctttaatgtctgctggggttcctgttaaaaggcaa
gttgcgggaatagccatggggcttattagtgaaggggataaatatgtggttttaagtgac
attcttggggaagaagatcatttaggtgatatggactttaaagtggctggtacaaaaaat
ggaattactggatttcaaatggatattaaaattgaaaatgttactaaaaatttaatgaga
gatgcccttgagcaggcaagagtaggtaggatacacatactgtctattatggatgctgta
atttcggattcaagagttggtatatctaagtatgctccaaaaattgttcagttgcaaatt
gatattgataagatatctcttgtaatagggtctactggaaaaaccgttaaggccataaca
gatgaatttgaagttaaggttcaaattgagcaaaatggaaaaattattcttttcggcgat
gatgattttaaaatgcaaaaggccaaagaaaaaatagaaagtattgtaagggaaccaaag
ataggtgaagtttatgaaggaattgttaaaaagattaatagctttggagcttttattgaa
cttactcccacaaaggaaggatttttaagtactcgtttgaaatctagagataacaagtat
ggttctggaagatttggaaatagcaatagatattcaagatttggtggtgggggagataat
ataaggggtaatgcagggttagttcgactcccaaaattagaagaaggtcagcgagttaaa
gttagaataattgatatagacaaattcggaaaaattgatcttgaaattgttagagataaa
gattattaa
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