Borreliella valaisiana: P613_04240
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Entry
P613_04240 CDS
T03221
Name
(GenBank) ATP-dependent helicase
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
bvt
Borreliella valaisiana
Brite
KEGG Orthology (KO) [BR:
bvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
P613_04240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvt03041
]
P613_04240
Enzymes [BR:
bvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
P613_04240
Spliceosome [BR:
bvt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
P613_04240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
HA2_N
AAA_22
AAA_19
Flavi_DEAD
T2SSE
Cas3-like_C_2
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AIJ30169
LinkDB
All DBs
Position
complement(870027..872498)
Genome browser
AA seq
823 aa
AA seq
DB search
MNDFKLPIYKYKDELIRVLKKNNVLIVESPTGSGKTTQLPRIIYEAGFAKLGKIGVTQPR
RIATISIAEYIAKHIGVNLGEEVGYKIRFEEITSPKTKIKLMTDGVLLQELKKDTLLYEY
DVIIIDEAHERSLNIDFILGLIKDISRKRDDFKIIVSSATINTKVFSKYFNNAPVVSIET
ITYPVQIIYNPPLLNTPKGMILKIKEIVLNVIKEKKTGDILIFLSGEKEIKETIKELQEL
NSKKNLIILPLYGRMPKEAQEQIFIATPKNKRKIIVSTNIAETSITIENIKIVIDSGKVK
TNKFQTKTHTYSLQEVPISKSSATQRAGRAGRVSKGTCYRLYKREDYQIREDYQKEEIYR
TDLSEVILRMADIGIRDFTHFDFISKPSTHSIQTASNILKSLDAINNKNELTEIGKYMIL
FPLVPAHSRALVESMINYPQAIYQTTIGLSFLSTSGIFLLPQNEEMEARQAHLKYKNPMG
DLIGFVNIFEDFKKAANKEAFTKENYLDLQGLEEIVNVQMQLENIVSKLNIPIIQKGVFD
NEGYLKSIMRGMRDYICFKTSKKKYKTVKAQNVIIHPGSLISTDSVKYFVAGEIIETTKM
YARSIGVLKKEWIDDISLNEELKHKNTPNKEKQITNAKQTKIINEIKIGRKIFKAEYKNN
IYVVKISLETLKEMILKKELNNQNNENLKKIKIQLMHKNITVFNNKKFSETIEIVKGMGK
DWHFIKKYETSNVNINEPEKMKNLLECTMQFISSPTKKNALFLALETDCFGNFQLKPKQN
FIMAIEESMESIKSLIENEEYIQKLHFIKKLINKVYKKLNYFF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatttcaaactcccaatttataaatacaaagatgaattaattagagtattaaaa
aaaaataatgttttaattgttgaaagtccaacaggcagtggaaaaactacccaattacca
agaataatatatgaagcgggttttgcaaaattaggaaaaattggagtaactcaaccaaga
aggatagctacaatatcaatagctgaatatattgccaaacatattggtgtaaaccttgga
gaagaagttggttacaaaataaggtttgaagaaattacaagtccaaaaaccaaaatcaaa
ttaatgacggacggggtgcttctgcaagaattaaaaaaagatacattgctttatgaatat
gacgtaatcataatagacgaagcacacgagagaagtttaaacatcgattttatattaggt
cttattaaagacatttcaagaaaaagggatgattttaaaatcatagtttcatctgccaca
ataaacacaaaagtattttcaaaatattttaacaatgcaccggttgttagcattgaaact
atcacatacccagtacaaataatatacaatcctcctcttttaaacacgccaaaaggaatg
atattaaaaataaaagaaattgtcttaaacgtaataaaagaaaaaaaaacaggagatatt
cttatatttttatccggagagaaagaaataaaagaaactataaaagaattacaagaatta
aactcaaaaaaaaatttaataatacttcctttatacggtcgaatgcccaaagaagctcaa
gagcaaatatttatagctacccctaaaaataaaagaaaaataatagtatcaacaaacata
gcagaaacttcaatcacaattgaaaatattaaaatagtaatcgatagtggaaaagttaaa
acaaacaaattccaaacaaaaactcatacctattcactccaagaagttccaatttcaaaa
tcatcagcgactcaaagagccggtcgagcaggaagagtttcaaaaggaacttgctacaga
ctttacaaaagagaagattatcaaataagagaagattatcaaaaagaagaaatatataga
acagacctgtctgaggtaatactaagaatggcggatattggaatcagagattttacccac
tttgactttatctcaaaaccatcaacacattctattcaaactgcaagcaacatattaaaa
tctctggatgctatcaacaataaaaacgaacttacagaaattgggaaatatatgatacta
ttcccattagtgccagcacattcaagagcattggttgaatcaatgatcaattatccacaa
gcgatctatcaaactacaataggtctatcatttctatccacaagtggaatttttctacta
ccccaaaatgaagaaatggaagctagacaagcccacttgaaatataaaaatccaatggga
gatttaattgggtttgttaatatctttgaagattttaaaaaagccgctaataaagaagct
tttacaaaggaaaattatttagacctacaaggccttgaagagatagtaaatgtacaaatg
cagcttgaaaacattgttagcaaattgaatataccaataatacaaaaaggtgtttttgat
aacgaaggatatttaaaatcaataatgagaggaatgagagattacatttgttttaaaaca
tcaaaaaagaaatataaaaccgtcaaagctcaaaacgtaataattcatcccggctcactt
attagtaccgactctgtaaaatatttcgttgcaggagaaattatagaaactacaaaaatg
tatgcaagatccattggggtcttaaaaaaagaatggattgatgacattagccttaatgaa
gagcttaaacataaaaacacgcctaataaagagaaacaaataacaaatgccaaacagaca
aaaattatcaatgaaattaaaataggaagaaaaattttcaaagcagaatacaaaaataac
atttatgtagtaaaaattagcctagaaacactaaaagaaatgattttaaaaaaagaatta
aacaaccaaaataatgaaaatttgaaaaaaattaaaatacaattgatgcataaaaatata
acggttttcaacaataaaaaattttcagaaactattgaaatagtcaaaggcatgggaaaa
gattggcattttataaaaaaatatgaaacaagcaatgtaaacattaatgaacctgaaaaa
atgaaaaatcttttagagtgtacaatgcagtttataagctcccctaccaaaaaaaatgct
ctttttttagcattggaaacagattgctttggaaatttccaattaaaacccaaacaaaat
ttcataatggcaatagaagaatctatggaaagcataaaaagcctaatagaaaacgaagaa
tacatacaaaagctacattttataaaaaaattaataaataaagtttacaaaaaattaaat
tactttttttaa
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