Phocaeicola vulgatus: BVU_0442
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Entry
BVU_0442 CDS
T00546
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bvu
Phocaeicola vulgatus
Pathway
bvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BVU_0442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvu03019
]
BVU_0442
03400 DNA repair and recombination proteins [BR:
bvu03400
]
BVU_0442
Enzymes [BR:
bvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BVU_0442
Messenger RNA biogenesis [BR:
bvu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BVU_0442
DNA repair and recombination proteins [BR:
bvu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BVU_0442
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecQ-1-like_HTH
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ABR38157
UniProt:
A6KXJ3
LinkDB
All DBs
Position
complement(630432..632612)
Genome browser
AA seq
726 aa
AA seq
DB search
MTENINLTDALKKYFGFDTFKGNQEAIIRNLLAGNDTFVLMPTGGGKSLCYQLPSLIMDG
TAIVISPLIALMKNQVDAMRNFSEEDGVAHFINSSLNKSAIDQVKSDILSGKTKLLYVAP
ESLTKEENVDFLKGVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPVIALTAT
ATPKVRMDIQKNLGMQDAQEFKSSFNRPNLYYEVRSKTNNIDRDIIKFIKANPGKSGIIY
CLSRKKVEELAEVLQANGINARAYHAGMDSATRTANQDGFLKEDIDVIVATIAFGMGIDK
PDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYSNKDLQKLEKFMQGKPVAEQEI
GKQLLLETAAYAESSICRRKSLLHYFGEEYTEENCGNCDNCLNPKKQVEAQDSLCAVIEA
IIAVKENFKADYIIDILLGKETSEVLAHKHEELEVFGSGMGEEEKMWNAVIRQALIAGYL
SKDVENYGLLKVTPEGHKFLKKPKSFKIVEDNDFEEEEEETPVRGGASCAVDPVLYSMLK
DLRKKLSKKLDVPPYVIFQDPSLEAMATIYPVTLEELQNIPGVGAGKAKRYGQEFCVLIK
KHCEENEIERPEDLRVRTVANKSKLKVSIIQAIDRKVALDDIAVSKGLEFGELLDEVEAI
VYSGTKLNIDYFLEEIMDEDHLNDIYDYFKESTTDKIDDAMDELGDDYTEDEIRLVRIKF
ISEMAN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaatataaatttaacggacgcattaaaaaagtattttggatttgatactttc
aaaggtaatcaggaagcgattatccgtaatctgcttgccggaaatgatacatttgttttg
atgcctacgggcggtggtaaatcgttatgctatcagttgccatcccttatcatggatgga
acagcaatcgttatatctcctttaattgcattgatgaagaatcaggtggatgccatgcgt
aatttcagtgaggaagacggagtagcacactttataaattcgtcattgaacaaatcggct
atagaccaggttaaatcggatatcctgagcggcaaaaccaaattgctctacgtagctccc
gaatccttgacaaaggaggagaatgtagatttcctgaaaggagtgaagatctcattttat
gcggtggatgaagcacactgtatttcggaatgggggcatgacttccgtccggagtaccgt
cgcatccgtcctattattaatgaaataggaaaggcgccggtgattgcccttactgctact
gcaactccgaaagtgcgtatggatattcaaaaaaatctgggtatgcaggatgcgcaggag
ttcaagtcctctttcaatcgcccgaacctgtattatgaagtgcgctcgaagacaaataat
attgacagggatattatcaagtttatcaaggctaatcctggtaaatcaggtattatctac
tgtttgagccgtaagaaggtggaagaattggccgaagtgcttcaagctaacggaatcaat
gcgcgtgcttatcatgccggaatggattctgctacacgcacagccaatcaagacgggttc
ctgaaagaggatatagatgtgattgtagctaccatcgcttttggaatgggaattgataag
cccgatgtgcgctttgtgatacattatgatattccgaaaagtctggaaggttattatcag
gaaacggggagagccggtcgtgacggaggggaaggtcagtgtattacgttctattccaac
aaggacttgcagaagctggagaagtttatgcagggaaagcccgtggcagagcaggaaatc
ggtaaacagttgctgttggaaacagctgcatacgcagagtcttctatatgccgtcgtaaa
tcattgttacattattttggggaagaatatacagaggagaattgtggaaattgtgataac
tgtttaaatcctaaaaagcaagtggaggctcaggattcattatgcgctgtgattgaagca
atcatagcagtgaaagaaaactttaaagcagattatataattgatattcttttgggtaag
gaaacgtcagaagtacttgctcataaacatgaagaactggaagtattcggttcaggcatg
ggagaagaagaaaaaatgtggaatgctgtcattcgtcaggctttgatagcgggttattta
agtaaagacgtagagaattacggtctgttgaaggttacccctgaaggacataaattcttg
aaaaaaccgaaatccttcaagattgttgaagacaatgattttgaggaggaggaagaagaa
actccggttcggggaggtgcctcttgtgcagtagaccccgtgctttactctatgttgaag
gatttgcgtaagaagctgtccaagaaactggatgtgccgccgtatgttattttccaggat
ccttctttggaggcgatggctaccatttatccggtgactttggaagaattgcagaatatt
ccgggcgtaggtgccggaaaggcaaaacgttatggccaggagttctgtgtattgataaag
aagcattgtgaggaaaatgaaatagagcgtccggaggatttgcgtgtccgtacggtggcc
aataaatccaaactgaaggtatccatcattcaggctattgaccggaaggtagccttggac
gacattgcagtgtcaaaggggttggagttcggtgaattattggatgaagtggaggctatt
gtttattcaggaaccaagctgaatattgattacttcctggaggaaattatggatgaagac
catttgaacgatatttatgattacttcaaggagtctacaacagacaaaatagatgacgcg
atggatgaattgggtgatgactatacggaggatgaaatccggttggtccgcatcaagttt
atttctgaaatggcaaattga
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