Phocaeicola vulgatus: BVU_1056
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Entry
BVU_1056 CDS
T00546
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bvu
Phocaeicola vulgatus
Pathway
bvu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bvu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BVU_1056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvu03021
]
BVU_1056
Transcription machinery [BR:
bvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BVU_1056
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_23
HTH_24
PF0610-like_N
HTH_11
GerE
Sigma70_ECF
TnsD
HTH_40
DUF2774
HTH_10
HTH_28
HTH_38
HTH_20
HTH_5
DUF722
HTH_Tnp_ISL3
PurL_C
Motif
Other DBs
NCBI-ProteinID:
ABR38747
UniProt:
A6KZ83
LinkDB
All DBs
Position
1406597..1407106
Genome browser
AA seq
169 aa
AA seq
DB search
MQLSPKEFEYQFRCLYRPLNMYALRYTENLDDAEDIVQQAFSDVWEKLVGGTSIQNLKAY
MYQTVRNRSLTLITNRQTHCETTELTDLEDLTEEERIIRSERDARLWTAIDHLPTERKKI
FLLSKRDGLTYQEIATELGISIKTVEHQISKALKTLRETAIKIYTFFFG
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcaattatcacccaaggaatttgaataccaatttcgctgtctttaccgtccgctgaat
atgtatgccctgcgctatactgaaaatctggatgacgcagaagacatcgtccaacaagcc
ttctctgatgtatgggagaagcttgtcggaggcacatctattcaaaacctgaaagcttat
atgtaccaaactgtacgtaaccgctcactcacactgataaccaaccgacaaacacactgt
gaaacaaccgaactgacagacttggaagatttaacagaagaagaacgcatcatccggtca
gaacgtgacgcgcgtttatggacagccatcgaccaccttcctaccgaacggaaaaagatc
tttctgctttccaaacgtgacggccttacttatcaggaaattgccaccgaactgggtatt
tctataaaaactgtcgaacatcaaatcagtaaggcactgaaaacattacgagaaacagcc
attaaaatatatacttttttcttcggataa
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integrated database retrieval system
