Phocaeicola vulgatus: BVU_2027
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Entry
BVU_2027 CDS
T00546
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bvu
Phocaeicola vulgatus
Pathway
bvu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bvu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BVU_2027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvu03021
]
BVU_2027
Transcription machinery [BR:
bvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BVU_2027
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_10
HTH_24
HTH_20
TnsD
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ABR39692
UniProt:
A6L1X8
LinkDB
All DBs
Position
2621320..2621910
Genome browser
AA seq
196 aa
AA seq
DB search
MENTEKLIVEQLKNGNEDAYKYIYDYHYVLLCHVANQYLNDNFLSETIVGDVIFHLWEIR
ETLNITISIRSYLIKAVRNRCIDYLKSRSEKKEISFSVLVPEEMSEEKYLQSDNYPLGIL
LERELEHEIRMAIDKLPVECRCVFEKSRFEEKKYEEISQELGISINTVKYHIKNALSFLQ
TELSKYLIALILFFSC
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacacagagaaactgattgtagaacaactgaaaaatggcaacgaagatgcttat
aaatacatctatgattatcattatgttcttttatgtcatgtagcaaatcaatatttgaac
gataattttttatcggaaactatagttggagatgtaatatttcacctttgggaaatcaga
gaaactttaaacattactatttctattagaagttatctgataaaggctgttcgtaatcgt
tgtatagactatctgaaatctagatctgaaaaaaaggaaatttcattttcagttttagta
ccggaagagatgtctgaagaaaagtatttgcagtcggataattatcctttgggaatatta
ttagaacgtgaattggagcatgaaatccgtatggcaatagataaactaccggttgaatgt
agatgtgtttttgaaaaaagtagatttgaggagaaaaaatatgaagaaatttctcaggaa
ttaggtatttctataaatacggttaagtatcatataaagaatgcattatctttccttcag
actgaattgagcaaatatttaattgctttgattttatttttttcgtgttaa
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integrated database retrieval system
