KEGG   Phocaeicola vulgatus: BVU_2078
Entry
BVU_2078          CDS       T00546                                 
Name
(GenBank) HD superfamily hydrolase
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
bvu  Phocaeicola vulgatus
Pathway
bvu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bvu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BVU_2078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bvu03019]
    BVU_2078
Messenger RNA biogenesis [BR:bvu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BVU_2078
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 KH-I_KHDC4-BBP Fez1 Cas3_HD
Other DBs
NCBI-ProteinID: ABR39741
UniProt: A6L227
LinkDB
Position
complement(2692722..2694257)
AA seq 511 aa
MITTVIIAIVCFAVGGGLSYMLFRYGLKSKYDIIIKEAQTEAEVIKKNKLLEVKEKFLNK
KADLEKEVALRNQKIQQAENKLKQRELMLNQKQEEVQRKRTEAEAIKENLEAQIVIIDKK
KDELDKLQMQEREKLEALSGLSAEEAKERLIESLKEEAKTQAASYINDIMDDAKLTANKE
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTID
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
IGKVPDEEPELPHALLGMKIAEKYKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEQLAMSYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgataacaacggtaataatagcaattgtgtgtttcgctgtaggtggtggcctatcatac
atgcttttcagatatggcctgaaatctaagtatgacatcatcatcaaagaggcacagacg
gaagctgaagtaattaaaaagaacaagcttttggaagtaaaagaaaaattcctgaacaaa
aaagctgatctggaaaaagaagtcgccctacgtaaccaaaagattcagcaagccgaaaat
aaattaaaacaacgcgaactgatgttgaaccaaaaacaggaagaggttcaacgcaaacgt
acagaagcggaagctatcaaagaaaatctagaagctcaaattgtcatcatagacaagaaa
aaggatgaactggataaattacaaatgcaagaacgtgaaaaactggaagctctttccggt
ctttctgctgaggaggccaaagaacgcctgattgaatctttgaaagaagaagcgaaaaca
caggctgcttcctatattaacgacattatggacgacgccaaattaacagctaataaagaa
gctaaacgtatcgttatccagtctatccaacgagtagccacagaaactgctatcgaaaac
tctgtaaccgtattccatattgaatcggacgaaataaagggacgcatcatcggccgtgaa
gggcgtaatatccgggctttagaagcagcaaccggtgtcgaaatcgttgtagatgacacc
cccgaggctattgtactttcagcgtttgaccctgtacgccgcgaaattgcccgcttagca
ttacaccaactggttacagatggacgtatccacccggcacgcattgaagaagtggtagct
aaagtacgcaaacaggtagaagaagaaattattgaaaccggtaaacgtaccactattgat
ttaggtattcatggcctgcaccctgaattgatccgtattatcggtaagatgaaatatcgg
tcctcatacggtcagaaccttctacaacatgctcgtgaaacagccaatctttgcgctgtg
atggcttctgaactaggtttgaatcctaaaaaagcaaaacgtgccggattactgcatgat
ataggtaaagtacctgatgaagaaccggaattgccgcacgcattgttaggcatgaagata
gccgaaaaatataaagagaaaccagacatatgtaatgctatcggtgctcaccatgacgaa
actgaaatgactagcctgctggctcccatcgtacaggtatgtgatgccatttcaggcgca
cgtccaggcgctcgccgtgaaatcgtagaagcttatatcaagcgtttgaacgatctagaa
caattagccatgtcttatccaggggtaacaaaaacctatgccatccaagctggccgcgaa
ttacgtgtgattgtaggtgccgacaagattgacgacaaacagactgaaagtttatccggt
gaaattgcgaaaaagattcaagacgaaatgacttatccgggacaagtgaagattacagtc
atccgcgaaacacgtgcggtaagtttcgccaaataa

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