Phocaeicola vulgatus: BVU_3356
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Entry
BVU_3356 CDS
T00546
Name
(GenBank) putative RNA pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
bvu
Phocaeicola vulgatus
Brite
KEGG Orthology (KO) [BR:
bvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvu03009
]
BVU_3356
Enzymes [BR:
bvu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BVU_3356
Ribosome biogenesis [BR:
bvu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BVU_3356
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Glyco_hydro_39
DUF8148_M
DUF8772
Motif
Other DBs
NCBI-ProteinID:
ABR40982
UniProt:
A6L5L8
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All DBs
Position
complement(4195459..4196385)
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AA seq
308 aa
AA seq
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MSRGKNSDSGRPKARSVARYTIYNVTEPAELMDFLMRKMAGISRSKVKALLANRVILVDN
VITTQYNFALKPGMKVQISKVKNNREFKHPMLKLVYEDAYILVVEKKEGLLSVSTEHQKE
RTAQHILNEYVKRSHRFNRVFVVHRLDRETSGLMMYAKDEKTQNTLRDNWHDIVTDRRYV
SIVSGDMEKDYGTVESWLTDRKLYVSSSPVDNGEGKFAVTHYKTIKRANGYSLVELDLET
GRKNQIRVHMLDLGHPVVGDRRYGSECDPLGRLALHAFKLCFYHPVTKELMEFETPYPTA
FKGLMQKK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaggtaagaatagtgattccggcaggccaaaggcgagaagtgttgcccgatat
actatatataatgtgacggagcccgctgagctgatggattttctgatgcggaaaatggcg
ggaatcagtcgtagcaaggtaaaggcgttgcttgccaaccgcgtgattttggtagataat
gtgattactacccaatataatttcgcattgaaaccaggtatgaaagtgcagatatccaag
gtgaagaataatcgtgagtttaaacatccgatgctgaaactggtatacgaggatgcttat
atcttggtggtggaaaagaaggagggactgctttctgtcagcacagaacatcagaaggag
cgtactgcacaacatattttgaatgagtatgtaaaacgttcacatcgtttcaaccgcgta
tttgtagtacatcgtctggaccgtgaaacttcggggttgatgatgtatgccaaagatgaa
aaaacccagaatactttacgtgataattggcatgatattgtgacggaccgccgttatgtg
tctatcgtttctggtgatatggagaaagattacggtactgtagagtcttggttgaccgac
cggaaattgtatgtcagttccagtcctgtagataatggggaaggtaagtttgcggtcact
cattataaaacaataaagcgggccaatggatattcattggtggagttggatttggaaaca
ggacgtaagaatcagattcgtgtgcatatgttggatttaggtcaccctgttgttggtgac
cggcgctatggcagtgagtgtgatcctttaggacgattggcgttacatgccttcaagtta
tgtttctatcatccggtaacaaaagagttgatggagtttgaaactccttatcctacggca
tttaaaggattaatgcagaaaaaatag
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