Phocaeicola vulgatus: BVU_3409
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Entry
BVU_3409 CDS
T00546
Name
(GenBank) ATP-dependent exonuclease V, alpha subunit - helicase superfamily I member
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bvu
Phocaeicola vulgatus
Pathway
bvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BVU_3409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvu03400
]
BVU_3409
Enzymes [BR:
bvu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BVU_3409
DNA repair and recombination proteins [BR:
bvu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BVU_3409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
DEAD
PIF1
HHH
AAA_28
MeaB
nSTAND3
NPHP3_N
CbiA
TsaE
UvrD-helicase
NTPase_1
TrwB_AAD_bind
AAA_22
HHH_2
AAA
SLFN-g3_helicase
T2SSE
UvrD_C
Fer4_NifH
DUF5610
ResIII
SRP54
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABR41035
UniProt:
A6L5S1
LinkDB
All DBs
Position
complement(4249215..4251476)
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AA seq
753 aa
AA seq
DB search
MLKLRCVVERITYQNPENGYSVMRVKVKSYDDLVTLVGNLLEVPAGSVLLCEGEWKVDKR
YGSQFVCQSWEEVMPATVYGIEKYLGSGLVKGIGPKFAQLIVRQFGLETIDVIETDIERL
YEVPGIGKKRVEKICESWEKQKDIKNVMLFLQGYGVSTAYAAKIYRQYGKESIDKVKENP
YRLADDIWGIGFKTADSIAAKMGYEKNDLRRCKSGIIYTLNQLANEGHVYAEEEQLVQAA
LELLEADEAPIREALNNMVQTDDLKLEDEAIYLPPFYFAEVGTTNRLQALLRESEQNLFA
KKVDVQALSKETGIEYDEVQLQAIEEAIRSKVMVLTGGPGTGKTTTTQGIIAALKHMGLR
ILLAAPTGRAAKRMSEATGMESKTIHRLLEFNPKDGYKRNDENPLEGDALIVDECSMIDI
ILMNNLMKAIPSSMRVVFVGDIDQLPSVGAGNVLRDIIESEKIPVIRLTRIFRQAQTSRI
VMSAHAINQGRFPDTSNGKQTDFFFIQQEEPEKVAEEIVNLVKNRLPKAYSQGVSNIQVL
TPMQRGVVGAANLNMALQNALNPSQIALNRGGYSFRQGDRVMQLRNNYDKDVFNGDLGYV
ESVDMEERTLLVNFEERQVEYEASELDELTLAYATTIHKSQGSEYPIVVMPVLMTHYVML
QRNLVYTGITRAKKICVLIGTKKALSFAIRNMSVLKRNTKLKERLNPELAKPTEKKPVEK
KLSKIYPMNEPVLEAAAEPSESYGKKQPTIETK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacttcgctgcgtagtagaaagaatcacctaccaaaatcccgagaacgggtat
tcggtgatgagggtcaaggtcaaaagctatgacgacctggtgacactggtgggcaacctg
ctggaggtgcctgccggaagtgtgctgttatgtgagggcgaatggaaggtggacaaacgc
tacggcagccagttcgtgtgccaatcgtgggaggaggtgatgccggccacggtctatggc
attgagaagtatctgggaagcggactggtaaaaggcatcggtccgaagtttgcccaactc
atcgtccgtcagtttggtctggaaaccatcgatgtgatcgagaccgacatcgaacggctc
tacgaggtgccgggcatcggcaagaagcgcgtggagaagatttgcgagagttgggagaag
cagaaggacatcaagaatgtgatgcttttcctgcaggggtatggtgtcagtacggcctat
gcggccaagatttaccgccagtacggcaaggaaagcatcgacaaggtaaaggagaaccct
taccgactggctgacgacatctggggcatcggcttcaagacggccgacagcattgcagcg
aagatgggctacgaaaaaaatgacctccgccgctgtaagagtggcatcatctacaccttg
aatcagttggccaacgaagggcatgtctatgctgaagaggaacagttggtacaagctgcg
ttggaattgctggaagcggacgaagcgcctatccgtgaggctttgaataatatggtgcag
acggatgacttgaagttggaagacgaagccatctatctgccgcctttctactttgccgaa
gtaggtacgacgaacaggctgcaggctttgctccgtgaatcggaacagaacctctttgcc
aagaaggtagatgtgcaggctttatcaaaggaaactggcattgaatatgacgaggtgcag
ctgcaggccatcgaggaagccatccgttcaaaagtaatggtactgacggggggaccgggt
acgggtaagactaccaccacgcagggtatcattgcggctttgaagcatatgggacttcgc
attctgctggcggctcctacgggacgggcagccaaacgtatgagtgaagccaccgggatg
gagtccaagaccattcaccggctgctggagttcaatccgaaagacggctacaagcggaat
gatgagaatcccttggaaggggacgcactgattgtggacgagtgttcgatgattgacatc
atcctgatgaacaacctgatgaaggccattccctcttccatgcgcgtggtcttcgtgggc
gacattgaccagttgccgagtgttggtgccggcaatgtgttgcgcgacatcattgagagt
gaaaagattccggtgattcgactgacccgtattttccgtcaggcgcagaccagccgcatt
gtgatgagtgcccatgccatcaaccagggacgtttccccgatacgagcaacggcaagcag
acggatttctttttcatccaacaggaggagccggagaaggtggcggaggaaattgtgaat
ctggtgaagaaccgcctgccgaaagcctacagccaaggggtgagcaacattcaggttttg
acccccatgcaacgcggtgtggtgggtgctgccaatctgaacatggccttgcaaaatgca
ctgaatccttcccagattgccttgaacaggggaggttattccttccgtcagggcgaccgg
gtgatgcagctgcgcaacaactacgacaaggatgtgttcaacggggacctcggctatgtg
gaatcggtagatatggaggaacgtacgctgctggtgaactttgaggagcgtcaggtggaa
tacgaagcctcagaactggatgagttgacactggcctacgctacgaccattcacaagtcg
caaggatcggaatatcccatcgtggtgatgccagttcttatgacacactatgtaatgctg
cagcgtaacctggtttatacgggcatcacccgtgccaagaagatttgcgtgctcatcggt
accaaaaaggcgctttcatttgccatccgcaacatgtcggtgttgaaacggaacacgaaa
ctgaaggagcgactgaatccggaattggcaaaacccacggagaagaagcctgtagagaag
aagttgagcaaaatttatccgatgaacgaacctgttttggaagctgccgccgaacccagc
gaaagttacggaaagaaacaacctaccattgaaacgaaatag
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