Phocaeicola vulgatus: BVU_3538
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Entry
BVU_3538 CDS
T00546
Name
(GenBank) putative helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bvu
Phocaeicola vulgatus
Pathway
bvu03420
Nucleotide excision repair
bvu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BVU_3538
03430 Mismatch repair
BVU_3538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvu03400
]
BVU_3538
Enzymes [BR:
bvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BVU_3538
DNA repair and recombination proteins [BR:
bvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BVU_3538
MMR (mismatch excision repair)
Other MMR factors
BVU_3538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
DUF6094
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABR41156
UniProt:
A6L642
LinkDB
All DBs
Position
complement(4391379..4393769)
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AA seq
796 aa
AA seq
DB search
MTNYLEELNESQRNAVLYNEGPSLVIAGAGSGKTRVLTYKIAYLLERGYTPWSILALTFT
NKAAREMKERIARQVGDQARYLWMGTFHSIFSRILRCEAQAVGFTSNFTIYDSSDSKSLI
KSIVKEMQLDDKTYKPGVIQARISNAKNHLVFPDAYVSNAELYQYDLNAKVPATRDIYRR
YWERCRQSDAMDFDDLLVYTYMLFRDHPEICRKYAEQFRYVLVDEYQDTNFAQHSIVLQL
TQEHQRVCVVGDDAQSIYSFRGANIDNILKFTQLYKGAKLFKLEQNYRSTQTIVCAANSL
IEKNSEQIRKEVFSEKAKGEPIGVFNAYSDVEEGEIVANQIVKLRSREHYSYNDFAILYR
TNAQSRIFEEALRKRALPYKIYGGLSFYQRKEIKDVISYFRLAVNPNDEEAFKRVLNYPA
RGIGDTTLNKVIDAAAQHHVSLWMVLEEPLAYGLNINKGMHTKLQGFRELVESFIVEVPK
KNAYELGAMIVRQSGIMNEIYQSNDPENLSRQENIEELINGMHDFCATREEEGNENILLT
DFLSEVSLLTDQDNEKEGDAEKITLMTIHSAKGLEFKNVFVVGMEENLFPSALSLNSYKE
LEEERRLFYVAITRAEEHCYLSFAKSRFKYGKMEFSSPSRFLKDIDVHFLKLPQEEQMAR
RIDERASRFCREQNERAARSLFDEPASQSSYGRSSSNISGGQKTFLVGERPKVEIIRPSI
PRNLTKVGPETVSKPSAARNLSVNVQAGQVIEHERFGIGDVIKVEGIGENSKATVRFRNA
GEKQLLLKFARFKVVE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgacgaactatttagaagaattgaatgaaagtcagcgcaatgcggtgctttacaacgaa
ggtccctctttggtgatagccggagcaggttcggggaagacacgcgtactgacttataaa
atagcttatttactggagcggggatatactccttggtctattctggcattgacttttacc
aataaggctgctcgtgaaatgaaagagcgtatagcccgtcaggtgggcgatcaggcacgc
tatttatggatgggaacgttccattccattttttcgcgtatcctgcggtgtgaggcacag
gctgtcggctttacctccaattttaccatctatgattcttcagattcgaagagtttgatc
aagtctattgtaaaagaaatgcaattggatgataaaacctataaaccgggggtgatacag
gcgcgtatcagcaatgcgaaaaaccatttggtttttcccgatgcatatgtttcgaacgca
gagctttatcagtatgatctgaatgccaaagtacccgctacccgtgatatttaccgacga
tattgggaacgttgtcgccaaagcgatgcgatggattttgatgatttgttggtttatact
tatatgttattccgcgatcatcccgaaatctgccgtaagtatgcggagcagttccgttat
gtgctggtggatgagtatcaggatactaattttgcgcaacacagcattgtgcttcagctt
acccaagaacatcagcgtgtatgcgtagtgggggatgatgcacaaagtatttattccttc
cgaggggcgaatattgacaatatattgaaatttactcagctgtataagggagccaagctt
tttaaattggagcagaactatcgttctacccagaccattgtatgcgcggcaaacagtttg
atagagaaaaatagcgagcagataaggaaggaggtattttcggaaaaagcgaaaggggag
cctatcggagttttcaatgcctacagtgatgtggaggaaggggagattgttgccaaccag
attgtgaaactgcgttcgcgggaacattattcttataatgattttgctattttataccgt
acaaatgctcagagccgtatttttgaggaggctttgcggaagcgtgctttaccttataag
atttacggagggctttctttttatcaacgcaaggagattaaagatgttatatcttacttc
cgtctggcggtaaatccgaatgatgaggaggcttttaagcgggtgttgaattatccggcg
cgaggaatcggggatactacgttgaacaaggtcattgatgcggctgcacagcatcatgtc
agtctttggatggttttggaagagccgttggcatacggcttgaatattaacaagggtatg
catactaaattacaggggtttcgtgaactggtagaaagttttatagtggaggtcccgaag
aagaatgcatacgaattgggagcaatgattgttcgtcagtccggcattatgaatgagatt
tatcagagcaatgatcctgaaaatctgagccgtcaggagaatattgaagaactgataaac
ggtatgcacgatttttgtgcaacccgtgaagaagaagggaatgaaaacatcctgttgacg
gattttctgtcggaggtttctctgttgacagaccaggataacgagaaagagggggatgcc
gagaagattaccttgatgaccattcactctgctaaaggcttggagtttaaaaacgtcttt
gtagttgggatggaagagaacttgtttcccagtgctttgtcactcaattcgtataaggag
ctggaagaggagcgccgcttgttttatgtggcgattacacgtgccgaagagcattgctat
ttgtcttttgccaagagtcggtttaaatatggaaagatggagttcagtagccctagccgt
ttcttgaaagatattgatgtacatttcctgaagttacctcaggaggaacagatggcccgg
agaatagacgagagagccagccgtttctgtcgtgagcaaaatgaacgtgcggctcgttcc
ttgtttgacgaacctgcttctcagtcttcttacgggcgttcttcatcgaacatctctggt
ggtcagaaaacatttttagttggagaaagaccgaaagttgagattattcgtcccagtata
ccacgtaatttgaccaaggttggtccggaaacggtctcaaagccgtccgcagcgagaaac
ttgtcagtgaatgtacaggcagggcaggtgatagagcatgagcgttttggaataggcgat
gtgataaaggtggaaggaattggtgagaacagcaaagcgactgtccgtttccggaatgcc
ggagaaaaacaattattactgaaatttgcccgattcaaagttgtggaatag
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