Allobosea vaviloviae: BHK69_05130
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Entry
BHK69_05130 CDS
T04483
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bvv
Allobosea vaviloviae
Pathway
bvv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BHK69_05130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvv03400
]
BHK69_05130
Enzymes [BR:
bvv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BHK69_05130
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BHK69_05130
DNA repair and recombination proteins [BR:
bvv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BHK69_05130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AOO79943
UniProt:
A0A1D7TXU6
LinkDB
All DBs
Position
complement(1088226..1089116)
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVETVRRGLEPAMLGQVFARVEQNRLDLRFPLPDRFVARLTGRKVEALSRRAKYL
IVDLDDGQALIMHLGMSGRFVVEAPGTPPTEPGAYYNEIGRHLQHDHVVFHLGSGARVTY
NDVRRFGFMDLVPRADLAASRHFVGMGIEPLGNELSGETLAKLFAGKFAPLKAALLDQRL
VAGLGNIYVCEALFRAGLHPEAGAGSIATATGRPRPAAHALAQIIREVLEEAITSGGSTL
RDFAHADGSLGYFQHRFRVYDREGGACVTPGCGSMVKRLVQSGRSTFYCESCQPRR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaggtcgaaaccgttcgtcgtgggctcgagcccgccatgctgggg
caggttttcgcacgcgtcgagcagaaccggctcgatctgcgctttcccttgcccgaccgc
ttcgtcgcacgcctgaccggccgcaaggtcgaagccctgtcgcggcgcgccaaatatcta
atcgtcgatctcgatgacggccaggcgctgatcatgcatctgggcatgagcgggcgcttc
gtggtggaggcacccggcacgccgccgaccgagcctggcgcctattacaacgagatcggc
cggcacctgcagcacgaccatgtcgtcttccatctcggctcgggcgcgcgcgtcacctat
aacgatgtccgccgcttcggcttcatggacctcgtcccacgcgccgacctcgccgcctcc
aggcatttcgtcggcatgggcatcgagccattgggcaatgagctctcgggcgagacgctg
gcgaagcttttcgccgggaaattcgcgccgctgaaggcggccttgctcgaccagcgcctc
gtcgcgggcctcggcaacatctatgtctgcgaggcgctgttccgcgccgggctccatccc
gaagccggggccggctcgatcgcgaccgcgacgggccgtccacgaccggcggcgcatgcg
ctggcccagatcatccgcgaggtcctggaagaggcgatcacctccggcggctcgacgctg
cgcgacttcgcccatgccgacggctcgctcggctatttccagcaccggtttcgcgtctat
gaccgcgagggtggggcctgcgtgacgccgggctgcggttccatggtcaagcggctcgtg
cagtcgggccgctcgaccttctattgcgaaagctgccagccgcggcgctga
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