Bosea vaviloviae: BHK69_05570
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Entry
BHK69_05570 CDS
T04483
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
bvv
Bosea vaviloviae
Brite
KEGG Orthology (KO) [BR:
bvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvv03019
]
BHK69_05570
Enzymes [BR:
bvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BHK69_05570
Messenger RNA biogenesis [BR:
bvv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BHK69_05570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOO80015
UniProt:
A0A1D7TY21
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All DBs
Position
complement(1178693..1181200)
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AA seq
835 aa
AA seq
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MRAFDTKLPIDTVLDELAASLRERPNAVLVAPPGAGKTTRVPLALLDQPWAKGGKLILLE
PRRLAARGAANRMAQTLGERVGETVGLRVRLGSKIGPKTRIEVVTEGVFARMILDDPALD
GVAAVLFDEFHERSLDADFGLALALDAQAGLREDLRILVMSATLDGARVARLLGEAPVIE
SQGRAFPVETRYRGRDPLKRIEDQVTEAVLLALNEQAGSLLVFLPGQGEIRRVEERLRER
IREASVEIAPLYGALDQAEQDRAVLPAPKGRRKVVLATAIAETSLTIEGVRVVIDSGLAR
VPVYEPDIGVTRLETRRVSRAAADQRRGRAGRTEPGICYRLWEEAGTGALEAFARPEILS
ADLAPLLLDCAAWGVTDPTSLAFLDTPPAPALKEARALLTALHALDGDGRITPEGKALQA
LPLPPRLARMVVAAAGFGQASSAAELAALLVERGLGGDAIDLAERLERLGRERGGRAADM
RRLAEGWARSAEKARPKLRELALSPGLLLALAYPDRIARARSAGSGQYLLANGRGAALEP
SQRLAREPWLVVAEVTGAAQQARIMAAVAITEADILWLAGEGLAPFTIEERSEVTFERAA
RALRVRAIRRYGALLLAERPLPVEASLDNAMALAGGIAALGIGLLPWTKAQMQLRERVAF
LRRAMLASGSDNPWPDLTDEGLGPDASTWLTPHLLGRASLAAIQASDLEAALAELLPWDL
KRRLDAEAPTHFTAPTGSNLAVDYAAEAGPTISVRVQELFGLGLHPALAGGRVPLVLELL
SPGHKPIQITRDLPGFWRGSWSAVKSEMKGRYPRHPWPDDPAAAPPTTRAKPRGT
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccttcgacacgaagctccccatcgataccgtcctggacgagctcgcagcctcg
ctgcgggaacgacccaacgccgtcctcgtcgcgccccccggcgcgggcaagaccacgcgc
gtgccgctcgcgttgctcgaccagccctgggcgaagggcggcaagctgatcctgctggag
ccgcgccgtctggcggcacgcggcgccgccaaccgcatggcgcagacgctgggcgagcgc
gttggcgagacggtcggcctgcgcgtccggctcggctccaagatcggcccgaaaacccgc
atcgaggtcgtcaccgaaggcgttttcgctcggatgatcctcgatgatcccgcgctcgat
ggggtcgccgccgtgctcttcgacgagttccacgagcgctcgctcgatgccgatttcggc
ctggcgctggcgctcgatgcgcaagccggcctgcgcgaggatctgcgcatcctggtgatg
tcggcgacgctcgacggcgcgcgcgtggcgcgcttgctcggcgaagcgccggtgatcgag
agccaggggcgggcctttcccgtcgagacccgctatcgcggccgcgatccgctgaagcgc
atcgaggatcaggtcacggaggccgtgcttctggcgctgaacgagcaggcgggctcgctg
ctcgtcttcctgcccggccagggcgagatccgccgtgtcgaggagcgcctgcgcgaacgc
atccgcgaggcttccgtcgagatcgcgccgctctatggcgcgctcgaccaggccgagcag
gatcgcgccgtgctgcctgcgcccaagggccgccgcaaggtcgtgctggcgaccgccatc
gccgagacctcgctgacgatcgagggcgtgcgcgtggtgatcgattcagggcttgcccgc
gtgccggtctacgagcccgatatcggcgtgacccgattggagacgcgccgcgtcagccgc
gcggcggcagaccagcgtcgcggccgtgccgggcgcaccgagcccggcatctgctatcgc
ctctgggaggaggccggcaccggcgcgctggaggccttcgcacggcccgaaatcctctcc
gccgaccttgcccccctgctgctcgattgcgccgcctggggggtgaccgacccgaccagc
ctcgccttcctcgatacgccacccgcaccggccctgaaggaggcgcgcgccctgctgacg
gcgctgcacgcgctcgacggcgatggccgcatcacgccggagggcaaagcgctccaggcg
ctgcccctgccgccccggctggcgcgcatggtcgtggccgccgcgggcttcggccaggca
agctcggccgccgaactggccgcgctgctggtcgagcgcggcctgggcggcgacgcgatc
gatctggccgagcgcctggagcggctcggtcgcgagcgcggcggccgcgccgccgatatg
cgccggctggctgaaggctgggcgcgcagcgccgagaaggcgcgtcccaagctgcgggag
ctggcgctgtcgccgggcctcctgctggcgctggcctatcccgaccgcatcgccagggcg
cgcagcgcgggctccggccagtatctgctcgccaatggccgcggcgcggcgctggagccc
tcccagcggctggcgcgcgagccctggctcgtggtggcggaggtcaccggggccgcccag
caggcgcgcatcatggcggctgtggcgatcacggaggcggacatcctctggctcgcgggc
gaggggctcgcgcctttcacgatcgaggagcgcagcgaggtcacgttcgagcgcgccgcg
cgcgcgctgcgtgtccgcgccatcaggcgctatggcgcgctgctgctggcggaacggcca
ttgccggtcgaggcttccctggacaacgccatggcgctggccgggggcatcgccgcgctc
ggcatcggactcctgccctggacgaaggcgcaaatgcaattgcgcgagcgcgtcgctttc
ctgcgcagggcgatgctggcctcgggcagcgacaatccctggcccgacctgacggatgag
ggtcttggtcccgatgcctcaacatggctcacgccgcatcttctggggcgcgcctcactt
gcggcgatccaggcctccgatctcgaggcggcgctggccgagcttttgccctgggacctg
aaacgccggctcgatgccgaggcgccgacgcattttaccgcgccgacgggctccaacctt
gcggtcgactatgccgccgaggccggcccgacgatctcggtgcgggtgcaggaactcttc
gggcttggcctccacccggcgctggccggcgggcgcgtgccattggtgctggaattgctc
tcgccggggcacaagccgatccagatcacccgcgatctgccgggcttctggcgcggctca
tggtccgcggtgaagtccgagatgaagggccgctacccgcgccatccctggccggacgac
ccggccgccgccccgccgacgacaagggcgaagccgcgcgggacctga
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