Bosea vaviloviae: BHK69_25145
Help
Entry
BHK69_25145 CDS
T04483
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bvv
Bosea vaviloviae
Pathway
bvv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHK69_25145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvv03019
]
BHK69_25145
03009 Ribosome biogenesis [BR:
bvv03009
]
BHK69_25145
Enzymes [BR:
bvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BHK69_25145
Messenger RNA biogenesis [BR:
bvv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BHK69_25145
Ribosome biogenesis [BR:
bvv03009
]
Prokaryotic type
rRNA helicases
BHK69_25145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AOO83293
UniProt:
A0A1D7U7D4
LinkDB
All DBs
Position
complement(5452317..5454404)
Genome browser
AA seq
695 aa
AA seq
DB search
MSFLPTSPPLARALAERNYSDPTPVQNAVLEDTAAGRDLLVSSQTGSGKTVAYGLAIATT
LLGEAEAFGRAGKPLALIIAPTRELALQVQRELAWLYKYANARVIACVGGMDPRREAALL
DEGAHIVVGTPGRLRDHIERHRLDVSALKAVVLDEADEMLDLGFRDDLEFILKTTPAERQ
SLLFSATLPKAIIQLATNYQRNALRIEVTGGSRGHADIEYRAIRVYPKEAELAVVNLLRF
HDSPCSLVFCNTRNAVRHLEAILLERGFSAVALSGELSQSERNSALQALRDGRARVCVAT
DVAARGIDLPGLTLVIHAELPNDPEVMQHRSGRTGRAGNKGTSVLLVPVSRRRKAEMLIS
EAKVEAVWAGPPTAEEIRALDQQRLLSDPLLTGEADEDDAAMVEALLAGRSPQEIAAALV
RVYRSRLPGAEEVGDPNFQRDSRPIRSREEYAPREGGRFGEGREDSPRGEGPRKAGPRGN
TVWFVLNIGRKDGADPRQLLPMLCRRGKITRDEVGAIRIFDKETKVEIDADVAERFYELA
KAVDRDKIVIQPVTGEEERRPAKPFAEKASHAPSAHARPERDADRPPARAYEKKPYEKKP
YERKPYEGGEKKPYEGKKKAYEGKGKPFGAAKPYDPVRSDRDALSDPNVSFRSGPKPYAA
KPGGAKPYAGNKPGFGGKPAGKPFKGKKPGRDDRS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttcttcctacgagcccgccgctcgcgcgtgcgctcgccgaacgcaactattcc
gatccgacgccggtgcagaacgccgtgctcgaggacaccgccgccgggcgcgacctgctc
gtctcgtcgcagaccggctccggcaagacggtcgcctatgggctcgccatcgccacgacc
ctgctcggcgaggcggaagccttcggccgcgccggcaagccgctggcgctgatcatcgcg
ccgacgcgcgaattggcgctgcaggtccagcgcgagctcgcctggctctacaaatacgcc
aatgcccgcgtcatcgcctgcgtcggcggcatggacccgcgccgcgaggcggcgctgctc
gatgaaggcgcccatatcgtcgtcggcacgccaggccgcctgcgcgaccatatcgagcgg
caccgccttgacgtttccgccctcaaggccgtcgtgctcgacgaggccgacgaaatgctt
gatctcggcttccgcgacgatctcgaattcatcctgaagacgaccccggccgagcgccag
agcctgctgttctcggcgacgctgcccaaggcgatcatccagctcgcgaccaactaccag
cgcaacgcgctgcgcatcgaggtcaccggcggctcgcgcggccatgccgatatcgaatat
cgcgccatccgggtctatccgaaggaggccgaactcgctgtcgtcaacctgctgcgcttc
catgattcgccgtgctcgctggtgttctgcaacacccgcaatgccgtgcgccatctcgag
gcgatcctgctggagcgcggcttctcggccgtggcgctctcgggcgagctcagccagagc
gagcgcaattcggcgctgcaggcgctgcgcgacggccgggcgcgggtctgcgtcgcgacc
gacgtcgcggcacgcggcatcgatctgcccggcctgacgctggtcatccacgccgagctg
cccaacgatcccgaagtgatgcagcatcgctcgggccgcaccggccgcgccggcaacaag
ggcacgagcgtcctgctggtgccggtgtcgcgccgtcgcaaggccgagatgctgatctcc
gaggccaaagtcgaggcagtctgggccgggccgccgacggccgaggaaatccgcgcgctc
gaccagcagcggctgttgagcgatccgctgttgaccggagaggccgacgaggacgacgcc
gccatggtcgaggcgctgctggcgggacgttcgccgcaggagatcgcggccgcgctggtg
cgggtctaccgttcgcgtctgccgggcgctgaagaggtcggcgatccgaattttcaacgc
gattcgcgtccgatccgttcgcgcgaggagtatgcgccacgcgagggtggccggttcggc
gaaggccgcgaggacagtccgcgcggcgaggggccgcgcaaggccggcccgcgcggcaat
acggtctggttcgttctgaatatcggtcgcaaagacggcgccgatccgcgccaattgctg
ccgatgctgtgccgccgcggcaagatcacgcgcgacgaggtcggcgcgatccggatcttc
gacaaggagaccaaggtcgagatcgacgccgatgtcgccgagcgcttctacgagctggca
aaggcggtcgatcgcgacaagatcgtgatccagcctgtcaccggcgaggaggagcggcgc
ccggcaaagcccttcgccgaaaaggcgagccatgcaccttcggcgcatgcgcgccctgag
cgtgatgcagaccgtccgcctgccagggcttatgagaagaagccctacgagaagaagccc
tatgagcgaaagccctacgagggcggcgagaaaaagccctatgagggcaagaagaaggcc
tatgagggcaagggcaagcctttcggcgcagccaagccctatgatccggttcgcagcgac
cgggacgcgctgtccgaccccaatgtctcgttcaggtcggggccgaagccttatgccgcc
aagccgggcggagcgaagccctatgccgggaacaagcccggcttcggcggcaagcctgcc
gggaagccgttcaagggcaagaagccgggtcgcgacgaccgcagctga
DBGET
integrated database retrieval system
